Campylobacter coli RM4661: YSS_05985
Help
Entry
YSS_05985 CDS
T03166
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccy
Campylobacter coli RM4661
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccy03016
]
YSS_05985 (truB)
Enzymes [BR:
ccy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
YSS_05985 (truB)
Transfer RNA biogenesis [BR:
ccy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YSS_05985 (truB)
Prokaryotic type
YSS_05985 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHK77060
LinkDB
All DBs
Position
1115801..1116619
Genome browser
AA seq
272 aa
AA seq
DB search
MNKIFAAFKPAEMSSNAFLGQIKKRYKNKKAGYSGTLDPFAKGVLIVAFGQYTKLFRFLK
KTPKTYQATLWLGVKSLSLDNKNIQEIKLIKAFDIKLLEQIKMELLGKISYTPPQFSAKR
IEGKRAYEFAKRGENIELKSCIMEIFSCKIIHYTHPFLQLELSVSEGAYIRSYCELFAKK
LGINATLSSLERIREGEFFYNHEKSLNVLEYLNLKPNFIKDLTKLENGTKISLEELKFQD
EGFYYIENKKYFSIINIKENKVEYLLNKVEKC
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatttttgccgcttttaaacccgcagaaatgagttctaatgcttttttaggt
cagataaaaaaaagatataaaaataaaaaggcaggttattcaggaactttagatcccttt
gccaaaggggttttaatagtcgcctttgggcaatacactaagctttttagatttttaaaa
aaaactccaaaaacataccaagcaacactttggcttggggttaaatctctaagtcttgat
aataaaaacatacaagaaataaagcttataaaagcttttgacattaaactcttagaacaa
atcaaaatggaacttttaggaaaaatttcttataccccaccgcaatttagtgctaaaaga
atagaaggtaaaagagcttatgaatttgccaaaagaggtgaaaatatagagttaaaatct
tgtataatggaaattttctcttgcaaaatcatacattatactcatccctttttacagctt
gaattaagcgttagcgaaggagcttatataagatcttattgtgagctttttgctaaaaaa
ttaggtattaatgccactttaagttctcttgagcgcatccgtgagggagaatttttttat
aatcacgaaaaaagcttaaatgtgttagaatatctaaatttaaagcctaatttcattaaa
gatttaacaaaacttgaaaatggcactaaaatatccctagaagaattaaaatttcaagat
gagggtttttattatatagaaaataaaaagtattttagtattataaatattaaagaaaat
aaagtagaatatcttttaaataaggttgaaaaatgctaa
DBGET
integrated database retrieval system
