Campylobacter coli RM4661: YSS_08060
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Entry
YSS_08060 CDS
T03166
Name
(GenBank) formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ccy
Campylobacter coli RM4661
Pathway
ccy00630
Glyoxylate and dicarboxylate metabolism
ccy00680
Methane metabolism
ccy01100
Metabolic pathways
ccy01120
Microbial metabolism in diverse environments
ccy01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
YSS_08060
09102 Energy metabolism
00680 Methane metabolism
YSS_08060
Enzymes [BR:
ccy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
YSS_08060
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AHK77442
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Position
complement(1533172..1535385)
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AA seq
737 aa
AA seq
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MTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYA
RIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTAEEVENVTGISKE
LLIQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHD
NVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARW
WAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEA
GIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVIDPLYESKEDQEILFELAKKLG
FYEDFTKTLRDENGKIVWPENATREIASAVRSIGLNGWSPERLKKHTLNWDKFDEVTLEG
KDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGENLLAKNAPI
NSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGAIWSYDDSNIIATKCIEKGIVPYGNAK
ARAVVWTFKDQIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQKAKDYSKEFP
LNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELASEQKIKAGDMIWVHSPEGTK
IHVRVKLNPGVAKDMIFLPFHFTGVMQGVDLTHNFPKGTKPYASGESANTVTNYGYDIMC
QIPETKGGLCRISKDGV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccatcttggagatattcaaagaagtaaatgtatcattatcattggggcaaat
ccagcagtaaatcaccctgtaggttttagacacttcttaaaagcaaaagaaaaaggtgca
aagcttatcgttgtagatcctagatttacaaaaagtgcggcaaaagcggatatttacgca
agaattcgtccaggaactgacattgctttcatgtatggaatgttaaaaatcatctttgat
gaaggcttagaagatacaaaataccttgatgaaagagtttttggtatcgataaaattcgt
gaagaagctgcaaaatggactgctgaagaagtagaaaatgtaacaggaatttctaaagaa
ctcctcattcaaatcactcatgaagtagctaaaaataaaccaactacattgatttgggct
atgggcttaacacagcacaccgtaggaacttcaaatacgcgtttagcacctatagtacaa
atggttttaggaaatataggtaaatttggcggcggagtaaatattttacgcggacacgat
aatgttcaaggtgcttcagatatggcgtgtttgagtgaaaatttaccaggctattatcct
ttaaatgaagcgacttggagatattatgctaagatttggggcgttgattatgagtggctt
ttaggaaattttgtaagcaaagattggatgcataaaacaggactttcgcttgctagatgg
tgggcagcagctttaaatggaaaagatggaaatgatgctatcgataatgcaggaacgcct
ttaaaagctttagtagttatgggaaatggtatcacttcgactgcacaacaagtaaaagtt
aaagaaggtttggaagctttagagcttttagttttagccgatccttttgtaaatgaagca
gggattatcgcagaaagaaaagatggaatttatcttttacctgctgcaacgcagtttgaa
acaagtggaagcgtaacagctacaaatcgtagcggacaatggagatttaaggttatagat
ccactttatgaaagcaaagaagatcaagaaattttatttgagcttgccaaaaaattaggt
ttttatgaagactttactaaaaccttacgcgatgaaaatggcaagattgtttggcctgaa
aatgctactagagaaattgcaagtgcagttagaagtataggacttaatggttggagccct
gaaagacttaaaaaacatactttaaattgggataaatttgatgaggtgactttagaagga
aaagacgaagtagcgggtgaatactatgggcttccttggccttgctggagtgataaacat
ccaggatctcctgtactttataataccgatatcgaagtagcaaaaggtggtatgggattt
agaaataattttggccttgagtatgagggtgaaaatttattggctaaaaatgctccgata
aattcacctatagatacaggctatccacaaattactaaagataatatagaaaaagtttta
ggtattactttaagtgcccaagaaaaagaaaaaatgggtgcaatttggtcttatgatgat
agtaatatcatagcgactaaatgtatagaaaaaggtatagtgccttatggaaatgctaaa
gctagggctgtggtttggacatttaaagatcaaattccacttcaccgcgagccgcttcat
tctccaagaaatgatttggtgcaaaaatatcctagttttgaggatcaaaaagcgctttat
cgtgtggatacaaaatttgtttctgtgcaaaaggctaaggattattcaaaagaattccca
ctcaacctagtcacagcaagacttgtgaatttaaatggtgcaggtatggaaaatagagct
tcaatgtatcttactcgtttaacgcctgagatgttttgtgagataaatcctgaacttgca
agcgagcaaaagattaaagcaggggatatgatttgggtgcattctccagaaggaactaaa
attcatgtgagagtaaaactcaatccaggtgtagcaaaagatatgattttcttacctttc
cattttacaggtgtgatgcagggtgtggatttaacgcacaatttccctaaaggaactaaa
ccttatgcaagtggagaaagtgcaaatacggttacaaattatggttatgacattatgtgt
caaattcctgaaaccaagggcggcttatgccgtatctcaaaagatggggtgtaa
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