Campylobacter coli RM4661: YSS_08140
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Entry
YSS_08140 CDS
T03166
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ccy
Campylobacter coli RM4661
Pathway
ccy00300
Lysine biosynthesis
ccy00470
D-Amino acid metabolism
ccy01100
Metabolic pathways
ccy01110
Biosynthesis of secondary metabolites
ccy01120
Microbial metabolism in diverse environments
ccy01230
Biosynthesis of amino acids
Module
ccy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YSS_08140
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YSS_08140
Enzymes [BR:
ccy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
YSS_08140
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF5600
Motif
Other DBs
NCBI-ProteinID:
AHK77457
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Position
1551731..1552480
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AA seq
249 aa
AA seq
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MKFYKYCASGNDFVIMNASEKKDRSALAKELCNRYEGIGADGFIVILPHEKYDFEWEFYN
NDGSRAAMCGNGSRAAAHFAHHINGIKPHMAFLTGAGVIKANVDNNSVEVSLGKIKNIQE
AFSECEKNWQLCDTGVPHLVHFCENLDEFDLELCKQMREKYNANVNFVKVENDNTLRVRT
FERGVEDETQACGTGMGTCFYLAFLNKKIHNQARVIPKSGEELSFKFENEELFFKGKVRY
CFEANYNFS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttttataaatattgcgcaagtggcaatgattttgtgataatgaatgcgagtgaa
aaaaaagatagaagtgctttagctaaagaactttgcaatcgttatgaaggcataggtgcg
gatggctttatcgtgatattgcctcatgaaaaatacgactttgaatgggaattttataat
aacgatggctcaagggctgctatgtgtggcaatggctcaagggctgcggcacattttgca
catcatataaatggtatcaaacctcatatggcttttcttaccggagcaggagttataaaa
gcaaatgttgataataatagcgtagaagtttctttagggaagataaaaaacatacaagaa
gcctttagtgagtgtgaaaaaaactggcaactttgtgatacgggagttccacatttggtg
catttttgtgaaaatttggatgagtttgatcttgagctttgcaaacaaatgagagaaaaa
tataatgccaatgtaaattttgtaaaagttgaaaatgacaatactttaagagttcgcact
tttgaaagaggcgtagaagatgaaacacaagcatgtggcacgggcatgggaacttgtttt
tatcttgcattcttaaataaaaaaattcacaatcaagctagagtgattccaaaaagcggt
gaagagctaagttttaaattcgaaaatgaagaattattttttaagggaaaagtgagatat
tgctttgaagcgaattataatttttcttag
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