Campylobacter coli RM4661: YSS_09575
Help
Entry
YSS_09575 CDS
T03166
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccy
Campylobacter coli RM4661
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccy03032
]
YSS_09575
03400 DNA repair and recombination proteins [BR:
ccy03400
]
YSS_09575
Enzymes [BR:
ccy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
YSS_09575
DNA replication proteins [BR:
ccy03032
]
Prokaryotic type
DNA Topoisomerases
YSS_09575
DNA repair and recombination proteins [BR:
ccy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YSS_09575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
DUF1272
Lar_restr_allev
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
AHK77717
LinkDB
All DBs
Position
complement(1787104..1789206)
Genome browser
AA seq
700 aa
AA seq
DB search
MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGIKIEDDEFIPEYRITSD
HSALVKELKEKAKGAKEIYLATDEDREGEAIAYHIAKAIGKDENVLPRIVFHEITKNAIE
NALKNPRKLNMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQRGLSAGRVQSAALKIIVDRE
KEIRAFVPLEYFSIDMIFQKDLDAELVEFDKAKIEKLTIINKDRAKLILEACKNEVYSIS
DIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTMMIAQKLYEGVNTHEGVMGVITYMR
TDSLNLAKEAVENARKFIQVNFGKDYLPSKANVYTTKAKGAQEAHEAIRPTNLNFTPEIA
AKFLDKDELKLYTLIYNRFLACQMNPAISQTQNVFVKNDRAVFKISGRKILFDGYYKVYG
DMDKDKILPNLKIGENLKVQNLEMNSHFTEPPSRYSEAGLVKKLESLGIGRPSTYAPTIS
ILTSRDYVKIDKKQLIPSEVAFSVTEVLEKNFSDIVDSKFTSNLENTLDEIAEDKANWQE
TLKEFYYPFMRKVEEGKTKIASQKTVTKLGENCPDCGGELAIRKGRFGEFVACLNFPKCK
YSRNLKNESKNEAEVSASRAKAKGIGIVCPSCKEGEIVERLSKRGKFYGCSAYPKCNFIS
KYKPSDEKCEECGENLVIKELKKGTFLECLKCKIKKEIKD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatttaatcatagtagaatctcctgcaaaagctaaaaccataggaaatttt
ttgggaaaagattatgaagttatcgcttctaaaggacatattagagatttgcctaaatca
agctttgggattaaaatagaagatgatgaatttatccctgagtatagaatcacaagtgat
catagcgccttagttaaagaacttaaggaaaaagcaaagggagcaaaagagatttattta
gcaaccgatgaggatagagagggtgaggctatagcttatcatattgcaaaagctataggc
aaagatgaaaatgtcttaccgcgtatcgtttttcatgagattaccaaaaatgctatcgaa
aatgctttaaaaaatccaagaaaattaaacatgcactctgtaaatgctcagcaaaccaga
cgccttttagatcgcattgtagggtataagctcagccctttattaggacaaaaaattcaa
agaggacttagtgctgggcgtgttcaaagtgcggctttaaagatcatagtcgatcgtgaa
aaagaaattcgtgcctttgtacccctagaatactttagtattgatatgatttttcaaaaa
gatttagatgcagaactagttgagtttgataaagccaagatagaaaaacttaccattatc
aacaaagatcgtgctaaacttatactagaagcttgtaaaaatgaagtttatagtataagt
gacattgaaagcaaagaaagaaaaatcgctccgccgcctccttttatgacttcaacttta
caacaaagtgccagcaatcgccttggttttaaccctaaaaaaaccatgatgatagctcaa
aagctctatgaaggagtaaatacccatgaaggcgtgatgggggttattacctacatgaga
acagatagtttgaatttagccaaagaagcagttgaaaatgcaagaaaattcatacaggta
aattttggcaaagactatcttccaagcaaagcaaatgtttatactacaaaagctaaaggc
gcacaagaagctcacgaagctatacgccctactaatttaaattttactccagaaattgca
gctaaatttttagataaagacgagttaaagctctatacgcttatttataaccgcttttta
gcttgtcagatgaatcctgctatctctcaaactcaaaatgtttttgtaaaaaatgacaga
gcagtgtttaagataagtggtaggaaaattctttttgatgggtattataaagtttatggc
gatatggataaggataaaattttacccaatcttaaaatcggtgaaaatttaaaagtgcaa
aatttagaaatgaattcacattttacagaacctccttcaagatactctgaagctggactt
gtgaaaaaacttgaaagcttaggcataggccgtccttcaacctatgcaccgactatttct
atactcacaagccgtgattatgtaaaaatcgataaaaaacaactcattcctagtgaagtc
gcttttagtgtaactgaagtgcttgaaaaaaattttagcgatatagtagatagcaaattt
acttcaaatcttgaaaatactttagatgagatcgcagaagataaagctaattggcaagaa
actttgaaagaattttattatccctttatgaggaaggttgaagaaggaaaaacaaaaatt
gcaagccaaaaaacggtgactaaattgggtgaaaattgccctgattgtggtggtgaactt
gcgattagaaaagggcgttttggagaatttgtagcttgtttaaattttccaaaatgcaaa
tactcaagaaatttaaaaaatgaaagcaagaatgaagctgaagtaagtgctagcagggcc
aaggcaaagggcataggtattgtttgtccaagttgcaaagagggtgagatagtagagcgc
ctttcaaaacgcggtaaattttatggttgtagcgcttatccaaaatgtaattttataagt
aaatacaaaccaagcgatgaaaaatgtgaggaatgtggagaaaatttagtgataaaagag
ctaaaaaaaggcacattcttagaatgtttaaaatgcaaaattaaaaaagaaataaaggat
taa
DBGET
integrated database retrieval system
