KEGG   Campylobacter coli RM4661: YSS_10020
Entry
YSS_10020         CDS       T03166                                 
Name
(GenBank) hypothetical protein
  KO
K03196  type IV secretion system protein VirB11 [EC:7.4.2.8]
Organism
ccy  Campylobacter coli RM4661
Pathway
ccy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ccy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YSS_10020
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ccy02044]
    YSS_10020
Enzymes [BR:ccy01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     YSS_10020
Secretion system [BR:ccy02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   YSS_10020
SSDB
Motif
Pfam: T2SSE nSTAND3 ABC_tran FtsK_SpoIIIE AAA_7 TsaE ResIII AAA_22 DEAD Septin NACHT AAA_29 AAA_10 ATP_bind_1 Sigma54_activat AAA_14 DUF87 ORC-CDC6-like NPHP3_N TrwB_AAD_bind GvpD_P-loop AAA_16 PRK Pox_A32 Zeta_toxin MobB Microtub_bd AAA_24 nSTAND_NTPase5 AAA_SelU RNA_helicase PduV-EutP AAA_23
Other DBs
NCBI-ProteinID: AHK77833
LinkDB
Position
pRM4661_48kbp:31062..32054
AA seq 330 aa
MSITLDKYTQKFFGEFLKDDNINEICYNGDNKIWVQNSKGLWECIDTKLDFEQAGHFATA
SASFKKDKIDVSRPILSCILVGGERMQIVIPPATKSEHISITIRKPSKTRFKMEDHIKSG
LFEDLNPDDKNKIKPSDEELIKLYEARDYQNFISKAVSYGKNIIIAGETGSGKTTFMKTL
IDFISLDDRIITIEDVEEIKFYEHKNFVQLFYPSEAKSTDFLNSATLLKSCLRMKPDRIL
LAELRGAETYDFINVLASGHGGSITSCHAGSPEETFTRLALMTLQNPQGQCVPFEIIQKT
LKDLIDIVVHIHAHHGKRRISGIYFKEMER
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtcaataacgctagataaatatactcaaaaattttttggagaatttttaaaagatgat
aatatcaatgaaatctgctataacggcgataataaaatttgggtacaaaactctaaagga
ttatgggaatgtatagatactaaacttgattttgaacaagctggacattttgcaactgct
tcagcctcattcaaaaaagataaaatagatgtatcacgccctattcttagttgtattcta
gtaggtggagagcgtatgcaaattgttattcctcctgctacaaaaagcgaacacatttca
attactattagaaagccaagcaaaactcgctttaaaatggaagatcatattaaaagcgga
ctttttgaagatttaaatcctgatgataagaataaaatcaaaccaagcgatgaagaatta
atcaagctatatgaagcaagagattatcaaaattttatatccaaagctgttagctatggt
aaaaatattattatcgctggtgaaacaggaagcggtaaaactacctttatgaaaactctt
attgattttataagccttgatgataggattatcacaatagaagatgttgaagaaatcaaa
ttctatgaacacaaaaatttcgtgcaattattctatcctagcgaagcaaaaagtacagat
tttttaaattctgcaacacttttaaaatcttgtttaagaatgaagcctgataggatttta
ctagcagagcttagaggtgctgaaacttatgattttattaatgttttagctagtggtcat
ggtggaagtatcacaagttgccatgcaggaagccccgaagaaacatttacacgacttgct
ttaatgactctacaaaatccacaaggtcaatgcgtgccttttgaaattatccaaaaaaca
cttaaagacttaatagatattgtcgtgcatatccatgcccatcatggaaaaaggcgtatt
agcggcatttattttaaagaaatggagagataa

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