Sinomonas cyclohexanicum: SCMU_00070
Help
Entry
SCMU_00070 CDS
T07918
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ccyc
Sinomonas cyclohexanicum
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccyc03032
]
SCMU_00070 (gyrA)
03400 DNA repair and recombination proteins [BR:
ccyc03400
]
SCMU_00070 (gyrA)
Enzymes [BR:
ccyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SCMU_00070 (gyrA)
DNA replication proteins [BR:
ccyc03032
]
Prokaryotic type
DNA Topoisomerases
SCMU_00070 (gyrA)
DNA repair and recombination proteins [BR:
ccyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCMU_00070 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
BCT74165
LinkDB
All DBs
Position
8349..11027
Genome browser
AA seq
892 aa
AA seq
DB search
MSDETPENPTPGEDDQTSFGSGDPITVDRIEQVDLQTEMQRSYLDYAMAVIVGRALPDVR
DGLKPVHRRVLYAMYDGGYRPDRAFNKCARVVGDVMGTYHPHGDMAIYDALVRLIQDWVM
RYPLALGQGNFGSPGNDGAAAPRYTETKMAQLAMEMVRDIDEETVDFQDNYDGKNQEPTV
LPARFPNLLVNGSSGIAVGMATNIPPHNLREVASGVQWYLDNPEATREELLEALLTRIKG
PDFPTGATILGRKGIEDAYRTGRGSITMRAVVNVEEIQGRTCLVVTELPYMANPDNLAMK
IAELVKDGKIGGIADLRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQDNFAANML
AIVDGVPRTLSLDAFVRHWVMHQIDVIVRRTRYRLRKAEERMHILRALLKALDMLDEVIA
LIRRSSTVEDAREGLKSLLDIDDIQAQAILDMQLRRLAALERQKIMDEHDELEALIAEYN
SILADPARQRQIISEELSGIVEKHGDDRRTRVVAGFDGDMSVEDLIPEEEMVVTITRGGY
VKRTRSDQYRQQQRGGKGVKGAQLRGDDVVEHFFVTTTHHWLLFFTNLGRVYRAKAYELA
EGGRDAKGQHVANLLAFQPDERIAQVLALRDYQQAPYLVLATKGGLVKKTRLEDYDTNRA
AGVIAINLREDDELVSAQLVSETDDLMLVSRHGQSLRFTADDDALRPMGRATSGVTGMKF
RDDDELLAADVVTEDAFVFIVTEGGFAKRTSAEEYRVQGRGGLGIKVGKYQEERGHLVGA
LIVQEEDEVLVVMEGGKVVRSAVAGVPAKGRDTMGVIFAKPDKRDRIIAVAKNTERTLGE
DEESEDDGGPVPDGGGAEPNDSDVAETSEEGVAGAHAVTLAADSDQDLGGTE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgagactcccgagaaccccacgcccggcgaggacgaccagacgtcgttcggg
tccggcgaccccatcaccgtcgaccgcatcgagcaggtggacctgcagacggagatgcag
cgttcgtacctcgactacgcgatggccgtcatcgtgggccgcgcgctgcctgacgtgcgt
gacggcctcaagcccgtccaccgccgcgtgctgtacgcgatgtacgacggcggctaccgc
ccggaccgcgccttcaacaagtgcgcgcgcgtggtgggcgacgtcatgggaacgtaccac
ccgcacggcgacatggcgatctacgacgccctcgttcgtctcatccaggactgggtcatg
cggtacccgctcgcgctgggccaggggaacttcggctcccccggcaacgacggcgccgcg
gccccccggtacaccgagacgaagatggcccagctggccatggagatggtccgggacatc
gacgaggagaccgtcgacttccaggacaactacgacggcaagaaccaggagcccacggtc
ctgccggcgcggttcccgaatctgctcgtcaacggctcctcgggcatcgccgtcggcatg
gccacgaacatcccgccgcacaacctccgcgaggtggcctccggcgtccagtggtacctc
gacaaccccgaggcgacccgcgaggagctgctcgaggcgctcctgacgcgcatcaagggc
cccgacttccccacgggtgcgaccatcctggggcgcaagggcatcgaggacgcgtaccgc
acgggccgcggctcgatcacgatgcgtgcggtggtgaacgtcgaggagatccagggccgc
acgtgccttgtggtcaccgagctgccgtacatggccaacccggacaacctcgcgatgaag
atcgccgagctggtcaaggacggcaagatcggcggcatcgcggacctgcgcgacgagacg
tccggccgcaccggccagcgcctcgtgatcgtgctcaagcgggacgccgtggccaaggtc
gtgctcaacaacctctacaagcacacccagctgcaggacaacttcgcggcgaacatgctc
gcgatcgtcgacggcgtgccccgcaccctctctctcgacgccttcgtccggcactgggtc
atgcaccagatcgacgtcatcgtgcggcgcacgcggtaccgcctgcgcaaggccgaggag
cgcatgcacatcctgcgcgccctgctcaaggccctggacatgctggacgaggtcatcgcc
ctcatccgccgctcctccacggtcgaagacgcgcgcgagggcctcaagtcgctcctggac
atcgacgacatccaggcgcaggccatcctcgacatgcagctccgccgcctcgcggccctc
gagcggcagaagatcatggacgagcacgacgagctcgaggcgctcatcgccgagtacaac
tcgatcctcgccgacccggcccgccagcggcagatcatctccgaggagctttccggcatc
gtcgagaagcacggcgacgaccgccgcacccgcgtcgtggcgggcttcgacggcgacatg
agcgtcgaggacctcatccccgaggaggagatggtcgtcacgatcacccgcggcgggtac
gtcaagcggacccgcagcgaccagtaccgccagcagcagcgcggcggcaagggcgtgaag
ggcgcgcagctgcgcggggacgatgtggtggagcacttcttcgtcacgaccacgcaccac
tggctcctgttcttcacgaacctcgggcgcgtgtaccgcgccaaggcgtacgagctcgcc
gagggcgggcgggacgccaagggccagcacgtggcgaacctgctcgcgttccagcccgac
gagcgcatcgcccaggtcctcgcgctgcgcgactaccagcaggccccgtacctcgtgctc
gcaacgaagggcggcctcgtgaagaagacccgcctcgaggactacgacacgaaccgcgcc
gccggcgtcatcgccatcaacctccgcgaggacgacgagctcgtctcggcccagcttgtg
agcgagaccgacgacctcatgctcgtctcccgccacggccagtcgctgcgcttcacggcg
gacgacgacgcgctccgcccgatgggccgcgccacgagcggcgtgaccggcatgaagttc
cgtgacgacgacgagctcctcgccgccgacgtggtgaccgaggacgcgttcgtgttcatc
gtgaccgagggcggcttcgcgaagcgcacctcggccgaggagtaccgagtccagggccgc
ggcggcctcgggatcaaggtgggcaagtaccaggaggagcgggggcacctcgtcggggcc
ctcatcgtccaggaggaggacgaggtcctcgtggtcatggagggcggcaaggtggtccgc
tccgcggtggccggcgtgccggccaagggccgtgacacgatgggcgtcatctttgccaag
ccggacaagcgcgaccgcatcatcgcggtggcgaagaacacggagcgcacgctcggcgag
gacgaggagtcggaggacgacggcggcccggtcccggacggcgggggcgccgagccgaac
gacagcgatgtcgccgagacgtccgaggaaggcgtcgccggggctcatgccgtaacgttg
gctgcagactctgaccaggatctgggaggtaccgagtga
DBGET
integrated database retrieval system
