Sinomonas cyclohexanicum: SCMU_04860
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Entry
SCMU_04860 CDS
T07918
Name
(GenBank) transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ccyc
Sinomonas cyclohexanicum
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccyc03000
]
SCMU_04860
Transcription factors [BR:
ccyc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SCMU_04860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Peripla_BP_6
HTH_31
HTH_3
MarR_2
HTH_IclR
eIF-5a
DUF4148
HTH_26
Motif
Other DBs
NCBI-ProteinID:
BCT74644
LinkDB
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Position
complement(488555..489589)
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AA seq
344 aa
AA seq
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MTFTTTGAKPTLAAIARLTGVSAPTVSKVVNGREDVSPETRAKVLAALEEAGYQSPGQRR
TAAGPVVVEVAFDAINSNYATTVLSGILDFAAEADVEVLLSTTRHVRSQGGDLGSRAQRM
LDEGRAGMIVVTSAFAESQLMAFRRRQIPVVVIDPLNPPPADVVSVGATNWAGGRAAAEH
LLDLGHRRIAYLGGPESAECNQARLHGYMSALMSRGIDVDPGLVIHGNFRTEYGIEGLAR
LLALPERPTAIFAGNDAIAVGVLREARRRGIRVPEELSLVGFDGTALAEDSVPALTSVSQ
PLHDMGRAALRTVLRQSRGEQLDSHRVELATQLVVRESTAPPAG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaccacgacaggcgccaagcccacactggccgctatcgcgcgcctcacgggc
gtctcggcccccaccgtctcgaaggtcgtcaacgggcgcgaggacgtctcgccggagacc
cgcgccaaggtgctcgcggccctcgaggaggcggggtaccagtcgcccggccagcgccgc
accgccgccggaccagtcgtcgtcgaggtcgcgttcgacgccatcaactcgaactacgcc
acgaccgtcctcagcggaatcctcgacttcgccgccgaggccgacgtcgaggtcctgctg
agcaccactcggcacgtccgctcgcagggtggcgatctcggcagccgggcgcagcggatg
ctcgacgaggggcgcgcgggcatgatcgtcgtgacctcggccttcgcggagtcccagctc
atggccttccggcgccggcagatccccgtcgtcgtcatcgatccgctcaacccgccgccg
gccgacgtcgtgagcgtcggcgccacgaactgggcgggcggcagggccgcggccgagcac
ctcctggacctcggccaccgccgcatcgcctaccttgggggacccgagtcggccgagtgc
aaccaggcacggctccacggctacatgtccgccctcatgtcccgcggcatcgacgtcgat
ccgggtctcgtgatccacggcaacttccgcaccgaatacggcatcgaggggctcgcacgg
ctccttgcgctgcccgagcggcccaccgcgatcttcgccggcaacgacgcgatcgccgtc
ggggtcctgagggaggcccggcgccgcggcatccgggtgcccgaggagctgagcctcgta
gggttcgacgggacggcgctcgccgaggactccgtcccagccctgacgtccgtctcccag
ccgctgcacgatatggggcgcgcggctctgcgcacagtgctgcgccagtcccgcggcgag
cagctcgactcgcaccgcgtcgagctcgcgacccagctcgtggtgcgggagtcgacggcg
ccccccgcgggctga
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