Sinomonas cyclohexanicum: SCMU_06500
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Entry
SCMU_06500 CDS
T07918
Symbol
lacZ_1
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
ccyc
Sinomonas cyclohexanicum
Pathway
ccyc00052
Galactose metabolism
ccyc00511
Other glycan degradation
ccyc00600
Sphingolipid metabolism
ccyc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SCMU_06500 (lacZ_1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
SCMU_06500 (lacZ_1)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SCMU_06500 (lacZ_1)
Enzymes [BR:
ccyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SCMU_06500 (lacZ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2_N2
Glyco_hydro_72
Glyco_hydro_2
Motif
Other DBs
NCBI-ProteinID:
BCT74808
LinkDB
All DBs
Position
656747..659896
Genome browser
AA seq
1049 aa
AA seq
DB search
MSLSRTLTTAASAAYVTDPGPGGGRRVPARSWLRSDAPSLSLDGQWRFRLLPGVPGTPGG
RGALPAGEGAEAMAAEEYDDAAWGTLPVPSHWVLEGDGAHGRPIYTNVQFPFPVDPPFVP
DENPTGDYRRTFELPAQWLAAGPAGAPRTVLRFEGVESRYKVWVNGTEIGWGAGSRLAQE
FDVTDAVRAGANTVAVRVHQWSAGSYLEDQDQWWLPGIFRSVTLLSRPAGGIEDVWLRTH
FRAGDHGGTGTIEPEVRAPASSFPVRLEVPELGIDVEWAAPGDVAPVEAGAVGPWTAETP
RLYDATVSGAAEAVSLRIGFRTVEIVGDQFLVNGRKVVFHGVNRHETHPRRGRAFDEDFA
REDLALMKRSNVNAIRTSHSPPHPRLLELADEMGFWVILECDLETHGFERHGWAQNPSDE
PMWREALLDRIERTVERDKNRPSIVMWSLGNESGTGQNLAAMSAWIHARDAGRPVHYEND
YAGAYTDVYSRMYATLPEVETIGRDGDTTPLLGCSPAEGARQRSKPFVLCEYVHAMGNGP
GNLSLYEDLVDRYPRLHGGFVWEWRDHGIAARTTDGTEYFAYGGDFGEEVHDGNFVLDGL
VLSDSTPSPGLFEFKAVVAPVGLSFSGLGPGSGEPSVRVANLRHTADLGDLAFRWRLEDD
GALVASGELAVEGPDGGPLAAGASAEVSLPVSAEECSGEAWLTVEAVLAHDAAWAPSGHE
VASSQARLTVPAPRALPFASRPAGGEWRSAVGGGRLALGPAEFDDGRLVELAGLPVDGPR
LELFRAPTDNDRGWFVGSYIDADPWARNANGIPGTGKPGPSSAARWAAAGLDRLHGRVEA
VAVSDAAVRVRTRYAAADQVCTVGVEEQWLLDSEGLWLRVDIVPSTGWEGVWPRVGVRIG
LPAEVDAARWFGLGPRESYPDSLDAAHVGRYEAGIDELAVRYARPQETGHRSGLRSLDLL
RGGELWVRFDAFADTRGRLPGFTLSRHTAQELAAAGHPYELPRPTRSWLYLDAAQHGLGT
RSCGPDVWPTAALAPESRTLTFRVAALGA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgtcccgcaccctgaccaccgcagcgtcggccgcctacgtcaccgacccgggc
cccgggggcgggcggcgcgtgccggcacgctcgtggctgcgcagcgatgcgccctcgctc
tccctcgacgggcagtggcgcttccggctcctgcccggggtccccgggacgcccggcggg
cgcggcgccctgcccgccggggagggcgccgaggcgatggccgccgaggagtacgacgac
gccgcctggggcacgctgcccgtcccgtcccactgggtcctggagggcgacggcgcgcac
ggccgccccatctacacgaacgtccagttccccttcccggtcgatcccccgttcgtcccc
gacgagaacccgaccggcgactaccgccgcacgttcgagctgcccgcacagtggctcgcg
gccggccccgccggcgccccccggaccgtgctgcgcttcgagggcgtcgagtcccggtac
aaggtctgggtcaacggcaccgagatcggctggggtgcgggcagccgcctcgcccaggag
ttcgacgtcacggacgccgtccgggccggggccaacacggtcgcggtccgcgttcaccag
tggtccgcaggaagctatctcgaggaccaggaccagtggtggctcccgggcatcttccgc
tccgtgaccctcctgtcccgccctgccggcgggatcgaggacgtctggctccgcacccac
ttccgggctggcgaccacggcggcaccgggacgatcgagcccgaggtgcgggcgccggcg
tcgtccttccccgtccggctcgaggtgcccgagctcgggatcgacgtcgagtgggccgcc
cccggggacgtcgccccggtggaggcgggcgccgtcgggccgtggaccgcggagacgccg
cggctctacgacgcgacggtgtccggcgcggcggaggccgtctccctgaggatcggcttc
cgcacggtggagatcgtcggggaccagttcctcgtcaacgggcgcaaggtcgtgttccac
ggcgtcaaccgccatgagacccacccgagacgcggacgggccttcgacgaggacttcgcc
cgcgaggacctcgcgctcatgaagcgctcgaacgtcaacgccatccgcacgagccattct
ccgccgcacccgcgcctgctcgaactcgccgacgagatgggcttctgggtgatcctcgag
tgcgacctcgagacccacgggttcgaacggcacggctgggcgcagaacccgagcgacgag
ccgatgtggcgggaggccctcctggaccggatcgagcggaccgtggagcgtgacaagaac
cgcccctcgatcgtcatgtggtccctcggcaacgagtcgggcacggggcagaacctcgcg
gcgatgtccgcatggatccacgcgcgggacgcgggccggccggtccactacgagaacgac
tacgccggcgcgtacacggacgtgtactcgcgcatgtacgcgaccctgcccgaggtcgag
acgatcgggcgcgacggcgacaccacgcccctgctgggctgctccccggccgagggcgcg
cggcagcggtccaagccgttcgtcctgtgcgagtacgtccacgccatgggcaacggcccc
gggaacctctcgctgtatgaagacctcgtggaccggtacccgcgcctgcacggcgggttc
gtgtgggagtggcgcgaccacggcatcgcggcccgcacgaccgacgggaccgagtacttc
gcgtacggcggcgacttcggtgaggaggtccacgacggcaacttcgtcctcgacggcctc
gtcctctccgactcgacgccctcgcccgggctgttcgagttcaaggccgtggtggcgccc
gtggggctctccttctcggggctcgggcccggctccggcgagccctcggtgcgggtcgcg
aacctgcgccacactgccgacctgggcgacctcgccttccgctggcgcctcgaggacgac
ggcgcgctggtcgcctcgggcgagctcgccgtggaggggcccgacggcggtccgctcgcc
gcgggcgcttccgccgaggtctccctcccggtctcggccgaggagtgctcgggcgaggcg
tggctcaccgtcgaggcggtcctcgcgcacgacgccgcgtgggcgccctcggggcacgag
gtcgcctcctcgcaggcgcgcctcaccgtgccggcgccgcgggcgctgcccttcgcctcg
cggcccgctggcggtgagtggcgctccgccgtgggcgggggcaggctcgcgctcggaccg
gcggaattcgacgacgggcggctcgtggagctcgcggggctgcccgtggacgggccgcgg
ctcgagctgttccgggctcctacggacaacgatcgcggctggttcgtgggcagctacatc
gacgcggatccctgggcgcgcaacgccaacggcatccccggaacggggaagccggggccg
tcgtcggccgcgcgctgggcggccgcggggctcgaccggctccacgggcgcgtcgaggcc
gtcgcggtctccgacgccgccgtgcgcgtgcgcacgcggtacgccgccgcggaccaggtc
tgcaccgtcggagtcgaggagcagtggctcctcgactccgagggcctgtggctgcgcgtg
gacatcgtcccgtccacgggctgggagggcgtgtggccgcgagtcggcgtgcggatcggg
ctgcctgcggaggtggacgccgcccgctggttcggcctcggcccgcgcgagtcctacccg
gacagcctcgatgcggcgcacgtggggcggtacgaggccgggatcgacgagctcgctgtc
cggtacgcgcgcccgcaggagaccgggcaccggtctggcctgcgctcgctggacctgctg
cgcggcggcgagctgtgggtgcggttcgacgcgttcgcggacacgcggggccgcctgccc
ggcttcacgctgagccggcacaccgcccaggagctcgccgcggccgggcacccgtatgag
ctgccgcgcccgacgcgctcgtggctgtacctcgacgcggcccagcatggcctcggcacc
cggtcctgcgggccggacgtctggcctacggcggccctcgcccccgaatcgaggacgctc
accttccgggtggcggccctcggcgcctga
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