Sinomonas cyclohexanicum: SCMU_15810
Help
Entry
SCMU_15810 CDS
T07918
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccyc
Sinomonas cyclohexanicum
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccyc03016
]
SCMU_15810 (truB)
Enzymes [BR:
ccyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCMU_15810 (truB)
Transfer RNA biogenesis [BR:
ccyc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCMU_15810 (truB)
Prokaryotic type
SCMU_15810 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DUF2244
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BCT75739
LinkDB
All DBs
Position
1632691..1633578
Genome browser
AA seq
295 aa
AA seq
DB search
MLSGLVIVDKPRGWTSHDVVGKVRRLAGTRKVGHAGTLDPMATGVLVVGINKATRLLSHI
VGTEKTYTATIRLGQRTVTDDAEGEILEERIAAAVTEQQVRDAAARLTGDILQVPSSVSA
IKVAGERSYARVRAGEQVTLEARPVTIHAFEIHGIRRERAGKLQDVDVTVRCSSGTYIRA
LARDLGADLGVGGHLTALRRTQVGPYGIEQARTLEQLAEDFEVLPLADAARELLPVRELS
ADETVELSFGRRIPATGTEALTAAFAPDGALVALVKDVAGLAKPELVFAAQGEDA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgctttcaggactggtgatcgtggacaagccacgcgggtggacgagccacgacgtggtg
gggaaggtccgcaggctcgcgggcacgcgcaaggtgggccatgccggcacgctggacccc
atggccacgggggtgctcgtggtgggcatcaacaaggccacccgcctcctctcccacatc
gtcggcaccgagaagacgtacacggcgacgatccggctgggccagcgcacggtcaccgac
gacgccgagggcgagatcctcgaggaacggatcgccgccgcggtcaccgagcagcaggtc
cgcgacgccgccgcccggctcacaggggacatcctccaggtgcccagcagcgtgagcgcc
atcaaggtcgcgggcgagcgctcgtacgcgcgcgtccgggcgggggagcaggtcaccttg
gaagcccggcccgtcacgatccacgcgttcgagatccacggcatccgccgcgagcgggcc
ggcaagctccaggacgtcgacgtcaccgtgcgctgctcctcgggcacgtacatccgggcc
ctggcgcgcgacctcggcgccgacctcggggtcggcggtcacctcacggccctgcgtcgc
acccaggtcgggccctacgggatcgagcaggcacggaccctcgaacagctcgccgaggac
ttcgaggtgctcccgctcgcggatgccgcgcgcgagctgctgcctgtgcgcgagctcagt
gccgacgagacggtcgagctgtcgttcgggcgccgcatccccgcgacgggcacggaggcg
ctcaccgctgcgttcgcgcccgacggcgcgctggtcgccctcgtgaaggacgtcgccggc
ctcgccaagcccgagctcgtcttcgccgcgcagggagaggacgcctga
DBGET
integrated database retrieval system
