Sinomonas cyclohexanicum: SCMU_15870
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Entry
SCMU_15870 CDS
T07918
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccyc
Sinomonas cyclohexanicum
Pathway
ccyc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCMU_15870 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccyc03019
]
SCMU_15870 (pnp)
03016 Transfer RNA biogenesis [BR:
ccyc03016
]
SCMU_15870 (pnp)
Enzymes [BR:
ccyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SCMU_15870 (pnp)
Messenger RNA biogenesis [BR:
ccyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SCMU_15870 (pnp)
Transfer RNA biogenesis [BR:
ccyc03016
]
Prokaryotic type
tRNA degradation factors
SCMU_15870 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_PNO1_2nd
RNase_PH_C
PCB_OB
S1_RRP5
KH_2
aRib
KH_KhpA-B
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
BCT75745
UniProt:
A0ABN6FHB7
LinkDB
All DBs
Position
1636719..1639010
Genome browser
AA seq
763 aa
AA seq
DB search
MEGPEIQFSEAVIDNGRFGQRVVRFETGRLAKQAAGAAMVYIDDDTALLSATTAGKSPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLMDRPLRPAFVKGLRNEVQ
VVVTVLAVNPDELYDAVAINAASMSTQLGGLPFSGPIGGVRVALVHDENGAQWVAFPKHS
QLAKATFSMVVAGRVVSGGTGSGAAGDDIAIMMVEAEATDNAWNLIKDEGATAPTEEIVA
EGLEAAKPFIRALCEAQQDLADRAAKPTTEFPIFLDYEADAYDAVDGASAAKLAEVFQIA
DKQERDTASDALKAEVLAQLAEQFEGREKELSAAFRSVTKKVVRQRILKDQVRIDGRGLT
DIRQLTAEVEVLPRVHGSAIFERGETQILGVTTLNMLKMEQQIDSLSPVTHKRYMHNYNF
PPYSTGETGRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGS
VCASTLSLLNAGVPLKAPVAGIAMGLVSDEVDGQTRYAALTDILGAEDAFGDMDFKVAGT
SEFVTAIQLDTKLDGIPASVLAAALKQAREARLHILSVINAAIDRPDELSEFAPRIIAIK
IPVDKIGEVIGPKGKMINQIQEDTGADISIEDDGTVLIGATDGSSAEAARAAVNAIANPQ
LPEVGERYLGTVVKTTTFGAFVSLTPGKDGLLHISELRKLAGGKRVDNVEDVVSVGQKVQ
VEITKIDDRGKLSLAPVVDEKPQDADSGADAVSAEPAAESADA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgagatccagttctctgaggccgtcatcgacaacggccgcttcggtcag
cgcgtcgtgcgcttcgagaccggccgtctggccaagcaggccgccggtgccgcgatggtc
tacatcgacgacgacaccgcgctcctctcggccacgacggccggcaagtccccgcgcgag
ggcttcgacttcttcccgctgacggttgacgtcgaggagcgcatgtacgccgcgggccgc
atccccggctcgttcttccgccgcgagggccgcccctcgaccgaggccatcctcgcgtgc
cgcctcatggaccgcccgctgcgcccggcgttcgtcaagggcctgcgcaacgaggtccag
gtcgtcgtgaccgtcctcgccgtcaaccccgacgagctctacgacgccgtggcgatcaac
gccgcgtcgatgtccacccagctcggcggcctgccgttctcgggcccgatcggcggcgtg
cgagtcgcgctcgtgcacgacgagaacggcgcccagtgggtcgccttcccgaagcactcc
cagctggccaaggcgacgttctcgatggtcgtcgccggccgtgtcgtctccggcggtact
ggctccggcgctgccggcgacgacatcgccatcatgatggtcgaggccgaggccaccgac
aacgcgtggaacctcatcaaggacgagggcgccaccgccccgaccgaggagatcgtggcc
gagggcctcgaggccgctaagccgttcatccgcgccctgtgcgaggcccagcaggacctc
gccgaccgcgcggcgaagcccaccacggagttcccgatcttcctcgactacgaggcggac
gcgtacgacgccgtcgacggggcttccgctgccaagctcgccgaggtcttccagatcgcg
gacaagcaggagcgcgacaccgcgtccgacgcactcaaggccgaggtgctcgcgcagctc
gccgagcagttcgagggccgcgagaaggagctctccgcagcgttccgctcggtgaccaag
aaggtcgtccgccagcgcatcctcaaggaccaggtccgcatcgacggccgcggcctgacg
gacatccgccagctcaccgccgaggtcgaggtgctcccgcgcgtccacggctccgcgatc
ttcgagcggggcgagacccagatcctgggcgtcacgacgctgaacatgctcaagatggag
cagcagatcgactcgctctcgccggtcacgcacaagcgctacatgcacaactacaacttc
ccgccgtactccacgggcgagacgggccgcgtcggctcgccgaagcgccgcgagatcggc
cacggcgccctcgccgagcgcgccctcgtgccggtcctgccctcgcgcgaggagttcccg
tacgcgatccgccaggtgtccgaggccctcggctcgaacggctcgacctcgatgggctcc
gtgtgcgcctcgaccctgtcgctcctcaacgccggcgtgccgctcaaggctccggtcgcg
ggcatcgcgatggggctcgtctccgacgaggtggacggtcagacccgctacgcggcgctg
accgacatcctcggcgccgaggacgcgttcggggacatggacttcaaggtcgccggcacc
tccgagttcgtcaccgcgatccagctcgacacgaagctcgacggcatccccgcctcggtc
ctcgccgccgcgctcaagcaggcccgtgaggcccgcctgcacatcctctcggtgatcaac
gccgcgatcgaccgcccggacgagctctccgagttcgccccgcgcatcatcgcgatcaag
atccccgtggacaagatcggcgaggtcatcggccccaagggcaagatgatcaaccagatc
caggaggacacgggcgccgacatctcgatcgaggacgacggcaccgtgctcatcggcgcg
accgacggctcctccgccgaggcggcccgggccgcggtcaacgcgatcgcgaacccgcag
ctgcccgaggtcggcgagcgctacctcggcaccgtcgtgaagaccaccacgttcggcgcc
ttcgtctcgctcaccccgggcaaggacggcctgctgcacatctccgagctgcgcaagctc
gccggcggcaagcgcgtcgacaacgtcgaggatgtcgtctcggtgggccagaaggtccag
gtcgagatcacgaagatcgacgaccgtggcaagctctccctcgcgcccgtcgtggacgag
aagccccaggacgccgactctggcgctgatgctgtctctgccgagccggcggccgaatcg
gccgacgcgtag
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