Sinomonas cyclohexanicum: SCMU_16180
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Entry
SCMU_16180 CDS
T07918
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ccyc
Sinomonas cyclohexanicum
Pathway
ccyc00300
Lysine biosynthesis
ccyc00470
D-Amino acid metabolism
ccyc01100
Metabolic pathways
ccyc01110
Biosynthesis of secondary metabolites
ccyc01120
Microbial metabolism in diverse environments
ccyc01230
Biosynthesis of amino acids
Module
ccyc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCMU_16180 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCMU_16180 (dapF)
Enzymes [BR:
ccyc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SCMU_16180 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BCT75776
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All DBs
Position
1667339..1668286
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AA seq
315 aa
AA seq
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MTLPAAAQSAPDVIHGLAGLPFAKGHGTGNDFVLVADPAGDRHLAEAEAAALCDRHQGIG
ADGLIRAIRSRELPEGISVLAEEPEAEWFMDYRNADGSLSEMCGNGVRVFVAFLLDQGLV
ELAPGEVLPIGTRAGVKRVERRSDGFAVDMGPWEFIDPQRAAADASDATVTAVGLDVARP
ALSVSMGNPHTVVALAEPSELAGLGLHTAPAVDPVPPHGTNVEFVVPSEPLVADGVGSVT
MRVHERGVGETQSCGTGACAAAVAIRYWAGAGAPDRWDVVVPGGRVGVAFIPGADGREHV
ELSGPAVIVAHGTLG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaccctccccgccgccgcccagtccgcccctgacgtcatccacggccttgcgggcctg
cccttcgcgaaggggcacggcacgggcaacgacttcgtgctcgtcgccgacccggcgggg
gaccggcacctcgccgaggccgaggccgcggcgctgtgcgatcggcaccaaggcatcggt
gcggacgggctcatccgcgctatccgctcccgcgagctccccgagggcatctccgtcctc
gccgaggagcctgaagcggagtggttcatggactaccgcaacgcggacggctcgctctcg
gaaatgtgcggcaacggcgtgcgcgtcttcgtggcattcctgctcgaccagggcctcgtc
gagctcgcccccggcgaggtgctgcccatcggcacgcgggccggagtgaagcgcgtcgag
cgccggtccgacggcttcgccgtcgacatggggccgtgggagttcatcgatccgcagcgc
gccgcggcggacgcgagcgatgcgacggtcaccgccgtggggctcgacgtcgcgcggccc
gccctgagcgtgagcatgggcaatccgcacacggtcgtggcgctggccgagccgagcgag
ctcgcgggcctcggcctgcacacggcaccggcggtggaccccgttccgccgcacgggacg
aacgtcgagttcgtggtgccgtccgagccgctcgtggcggacggggtcgggagtgtgacg
atgcgcgtgcacgaacgcggcgtcggcgagacccagtcctgcgggaccggcgcgtgcgcg
gccgccgtcgcgatccggtactgggctggcgccggggccccggatcggtgggacgtcgtg
gttcccggcgggcgggtcggcgtcgcgttcatccctggcgccgacggccgcgagcacgtg
gagctctcgggcccggccgtcatcgttgcccacggcaccctcgggtag
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