Sinomonas cyclohexanicum: SCMU_18540
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Entry
SCMU_18540 CDS
T07918
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ccyc
Sinomonas cyclohexanicum
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccyc03032
]
SCMU_18540
03400 DNA repair and recombination proteins [BR:
ccyc03400
]
SCMU_18540
Enzymes [BR:
ccyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SCMU_18540
DNA replication proteins [BR:
ccyc03032
]
Prokaryotic type
DNA Topoisomerases
SCMU_18540
DNA repair and recombination proteins [BR:
ccyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCMU_18540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
DUF4890
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
BCT76012
LinkDB
All DBs
Position
complement(1912088..1914667)
Genome browser
AA seq
859 aa
AA seq
DB search
MARRQNPRSSAGRTGADTLPGSDDFAENITDIDVAEEMETSFLEYAYSVIYSRALPDARD
GLKPVQRRILYMMSDMGLRPDRAHVKSARVVGEVMGKLHPHGDAAIYDAMVRMAQGFSLR
LPLIDGHGNFGSLDDGPAAPRYTEARMAAASLALTGDLDEDVVDFVPNYDGQLTQPEVLP
AAFPNLLVNGATGIAVGMATNMAPHNLGEVIAAAQLVIANPDATLEEVMDLVPGPDLPTG
GQIVGLDGIRDAYRTGRGSFKTRAKVAVEQISARRTGLVVTELPYTVGPEKVIEKIKDAV
NAKKLAGISDVTDLTDRQHGLRLVIEVKNGFNPQAVLQQLYRYTPLEDSFGINNVTLVDG
QPQTLGLLPLLHVYVGHRLDVVRRRTAFRLGKRKDRLHLVEGLLVAIMDIDEVIQIIRTS
DEASAARERLMSIYDLSEVQANYILELRLRQLTKYSRIELEKEQDELRRDIAELEAILGS
DTLLRDLVSRELGEVAATYGTPRRTLLLEHDDAPALGSKASASAPGAPGAASGAAKGKPA
PLQLEIADEPCWAILSASGLIARTAHAEPLAEAGPRVRHDVFRSVVRTTARGEVGAVTSA
GRMLRLQVVDLPLLAASAGLPNMAGGVPAKDFMALAKGESLVALVPLDAVVALGTAHGIV
KRVSPDYPLNREDWEAIALKPGDAVIGAAAAADADTLVFVTGQAQLLRYEASAVRPQGRT
AGGMAGIKLADGDEAIFFGVVGAEDAGAGAEPGEGVEVPRGVVVTIAGADGALPGTTAGT
AKVTPLDEYPAKGRATGGVRSHRFLKGEDRLTLAWVGRGPARASSSSGVARSLPSEFGRR
DGSGIPLAQAVDEIGPTFA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
ttggcacgtcgacagaaccctcgctccagcgcaggccgcactggagcggacactctcccc
ggatccgatgacttcgcggagaacatcaccgacatcgacgtggccgaggagatggagacc
tccttcctcgagtacgcctactcggtcatctactcccgcgccctgccggacgcccgcgac
ggcctcaagccggtccagcgccgcatcctgtacatgatgagcgacatgggcctgcggccg
gaccgcgcccatgtgaagagcgcgcgcgtggtcggcgaggtcatgggcaagctgcacccg
cacggggacgccgcgatctacgacgcgatggtgcgcatggcgcagggcttctccctgcgc
ctgccgctcatcgacggccacggcaacttcggctcgctcgacgacggcccggccgcgccg
cgctacaccgaggcccgcatggcagcggcctcgctcgcactgaccggagacctcgacgag
gacgtcgtcgacttcgtcccgaactacgacgggcagctgacccagcccgaggtcctcccc
gccgcattcccgaacctcctcgtcaacggcgccacgggcatcgcggtgggcatggccacg
aacatggccccgcacaatctgggcgaggtcatcgcggccgcccagctcgtgatcgcgaac
ccggacgcgacgctcgaggaggtcatggacctcgtccccggcccggacctgcccacgggg
ggccagatcgtgggcctggacggcatccgggacgcgtaccggaccgggcgtggctcgttc
aagacccgcgcgaaggtcgcagtcgagcagatctcggcgcgccgcacgggcctggtcgtg
accgagctgccgtacacggtcggccccgagaaggtcatcgagaagatcaaggacgccgtc
aacgccaagaagctcgcgggcatcagcgacgtcacagacctcacggaccggcagcacggg
ctgcggctcgtgatcgaggtcaagaacggcttcaacccgcaggccgtcctccagcagctc
taccgctacacgccgctcgaggactcgttcggcatcaacaacgtcacgctcgtggacggc
cagccccagacgctcggcctcctgccgctcctgcacgtctacgtgggacaccggctggat
gtggtgcggcgccgcacggcattccgcctcggcaagcggaaggaccggctccacctcgtc
gagggcctcctcgtggcgatcatggacatcgacgaggtcatccagatcatccgcacctcg
gacgaggcctcggcggcgcgcgagcgcctcatgtcgatctacgacctgtccgaggtccag
gcaaactacatcctcgagctgcgcctgcgccagctgaccaaatactcccggatcgagctc
gagaaggagcaggacgagctgcgccgcgacatcgcggaactcgaggcgatcctcggctcc
gacacgctcctgcgtgacctggtctcgcgcgagctcggcgaggttgccgcgacgtacggg
accccgcgccgcacgctgctcctcgagcacgacgacgcccccgccctcggcagcaaggcc
tcggcgtcggcgccgggcgctccgggcgccgcgtcgggtgcggcgaagggcaagccggcc
ccactgcagctggagatcgccgacgagccgtgctgggcgatcctctcggcgtcgggcctg
atcgcgcgcacggcgcacgccgagccgctcgccgaggccggtccgcgggtccggcacgac
gtcttccgctcggtcgtgcgcacgacggcgcgcggtgaggtcggggccgtgacctcggcc
gggcgcatgctgcggctccaggtcgtcgacctgccgctgctggccgcctcggccgggctg
cccaacatggctggcggcgtgccagcgaaggacttcatggccctcgccaagggcgagtcc
ctcgtcgccctcgtccccttggacgccgtcgtcgcgctggggaccgcgcacgggatcgtg
aagcgcgtctccccggactacccgctcaaccgcgaggactgggaggccatcgccctcaag
ccgggcgacgccgtgatcggcgccgccgccgcggcggacgcggacaccctcgtgttcgtc
accggccaggcgcagctcctgcgctacgaggcctcggccgtgcggccgcaggggcgcact
gccggcggcatggccggcatcaagctcgcggacggggatgaggcgatcttcttcggcgtg
gtcggcgcggaggatgccggcgccggggcggagcccggggaaggcgtcgaggtgccgcgc
ggcgtcgtcgtaacgatcgcgggggccgacggcgccctgccggggacgaccgccggaacc
gcgaaggtgacgccgttggacgagtaccccgcgaagggccgcgcgaccggcggggtccgc
tcccaccgcttcctcaagggcgaggaccgcctcacgctcgcgtgggtcggcaggggccct
gcgagggcgtcgtcgtcctcgggggtcgcgcggtcgctgcccagcgagttcggccgccgc
gacggctcgggcatccccctcgcgcaggccgtcgacgagatcggtcccaccttcgcctga
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