Sinomonas cyclohexanicum: SCMU_18820
Help
Entry
SCMU_18820 CDS
T07918
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ccyc
Sinomonas cyclohexanicum
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccyc03016
]
SCMU_18820
Enzymes [BR:
ccyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SCMU_18820
Transfer RNA biogenesis [BR:
ccyc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SCMU_18820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BCT76040
LinkDB
All DBs
Position
complement(1945937..1947316)
Genome browser
AA seq
459 aa
AA seq
DB search
MTAQPQDDTGNEAGSAPHGGPEAAPPATSAPQSIVVEGFEVPIPAVVELDEPRDGVPLVI
STQEGLERAAAALARGTGPAGVDAERASGFRYGQRAFLVQIRREGAGTWLIDPEPFDDLA
IINTALSGVEWIIHAATQDLPCLAELDMWPDRLFDTELAARLAGLPRVGLAAVVEQMLGF
SLAKEHSAADWSTRPLPEPWLRYAALDVEVLVELRDELADLLESQGKLGFAEEEFAATLA
AGVPAPRADPWRRTSGVHQIRDRRQLAAVRELWLERDALAQKRDIAPGKLIPDSALVALA
RAMPGTVPQLLTTRGFHGRAAQREAPRWLRAVSTARNLPDDQLPPLHLPSSGPPPPRVWD
DRDPEAAARFKTARPRISAVADSLGMPTENLLTPDHLRRIAWRPPAPLTAESLAAALRDL
GARAWQVDQVVPTLLEAFEHPEPLKVRKKATADQLDPDS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacagcctcaggacgacaccgggaacgaggcgggcagcgcgccccacggggga
ccagaggccgcaccgcccgccacgagcgcaccgcagagcatcgtcgtcgagggcttcgag
gtaccgatcccggcggtcgttgagctcgatgagccccgcgacggagtacccctcgtcatc
tcgacccaggagggccttgagcgcgccgccgccgccctcgcccgcggcacgggacccgca
ggcgtcgacgccgagcgcgcctcggggttccggtatggacaacgagcgttccttgtccag
atccgtcgggagggagccgggacctggctcatcgaccccgagcccttcgatgatctggcc
atcatcaacaccgccctgtccggggtggaatggatcatccacgctgcgacccaggacctc
ccgtgcctcgccgaactcgacatgtggccagaccggctcttcgacaccgagctcgccgca
cgcctggccggcctgccccgagtgggcctcgccgcggtcgtcgaacagatgctcggtttc
agcctcgcgaaggagcactccgccgcggactggtcgacgcggcccctccctgagccttgg
ctgcgctacgccgccctcgatgtcgaggtgctcgtcgagctgcgggacgagctcgcggac
ctcctcgagtcccaagggaagctggggttcgccgaggaggaattcgccgcgactctggca
gcgggcgtgcccgcgccccgagccgacccctggcgccgcacgtcaggcgtccaccagatc
cgcgaccgccgccagctggccgccgtgcgcgagctctggctcgagcgggacgcgctcgca
cagaagagggacatcgccccgggcaagctcatccccgattccgcgctcgtagcgctcgcc
cgcgcgatgccgggcaccgtcccgcagctgctcaccacgaggggcttccacggacgtgcc
gcccagcgcgaggcgccacggtggctgcgggccgtctccaccgcgcggaacctccccgac
gaccagctgccccccctgcatcttcccagctccggtccgcccccaccccgcgtgtgggac
gaccgggaccccgaggcagccgcgcggttcaagaccgcccgcccacggatctccgcggtc
gccgactctctcggcatgcccacggaaaacctcctgacccccgatcacctgcgccggatc
gcgtggcgaccgccggcgccgctcacggcagagtccctcgcggcggcgctgcgggacctg
ggcgcccgcgcatggcaggtcgaccaggtggtgccgacgctcctcgaagccttcgagcat
ccggaaccgctcaaggtcaggaagaaggccacggcggaccagttggaccccgactcgtag
DBGET
integrated database retrieval system
