Sinomonas cyclohexanicum: SCMU_23390
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Entry
SCMU_23390 CDS
T07918
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ccyc
Sinomonas cyclohexanicum
Pathway
ccyc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCMU_23390 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccyc03019
]
SCMU_23390 (orn)
03009 Ribosome biogenesis [BR:
ccyc03009
]
SCMU_23390 (orn)
Messenger RNA biogenesis [BR:
ccyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCMU_23390 (orn)
Ribosome biogenesis [BR:
ccyc03009
]
Eukaryotic type
Pre-60S particles
RNases
SCMU_23390 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BCT76497
UniProt:
A0ABM7PW65
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All DBs
Position
2432766..2433401
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AA seq
211 aa
AA seq
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MPISNEHIVWIDCEMTGLDPVADALIEVAVLVTDSELNILGDGVDVVIKPSDEALSGMND
FVRTMHTESKLIDELPSGMTLDAAQAEVMQYIRTWVKEPNKAQLGGNSVGTDRLFLARDM
PEVIEHLHYRVIDVSTIKELARRWYPRAYFQAPAKTGNHRALGDIRDSIDELRYYRETVF
VRAPGPESAAAREVAQRIAAGAPGPSAEEKS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatcagcaacgaacacattgtctggatcgactgcgagatgaccggcctcgacccg
gtcgcggatgccctcatcgaggtcgccgtgcttgtgacggattcggagctcaacatcctc
ggtgacggcgtcgacgtcgtcatcaagcccagcgacgaggcgctgtccggcatgaacgac
ttcgtgcgcacgatgcacaccgagtcgaagctgatcgatgaactccccagcgggatgacg
ctcgacgccgcccaggcggaggtcatgcagtacatccgcacctgggtcaaggagcccaac
aaggcccagctcggcgggaactcggtcggcacggaccggctgttcctggcccgcgacatg
cccgaggtcatcgagcacctccactaccgggtgatcgacgtctcgaccatcaaggagttg
gcccggcgctggtatccgcgcgcctacttccaggcgccggccaagaccgggaaccatcgg
gcgctgggagacatccgcgattccatcgacgaactccgctactaccgcgagactgtcttc
gtccgtgccccggggcccgagtctgcagctgcacgggaggtcgcccagcgcattgcagcc
ggcgcaccggggccgagcgcagaagaaaaaagttag
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