Sinomonas cyclohexanicum: SCMU_24790
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Entry
SCMU_24790 CDS
T07918
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ccyc
Sinomonas cyclohexanicum
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccyc03400
]
SCMU_24790 (sbcD)
DNA repair and recombination proteins [BR:
ccyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCMU_24790 (sbcD)
Archaeal homologous recombinant proteins
SCMU_24790 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BCT76637
LinkDB
All DBs
Position
complement(2588263..2589456)
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AA seq
397 aa
AA seq
DB search
MSVPPASVVRMKILHTSDWHLGRSFHGVGMLAAQAEWLDHLVDFVDSERIAAVLVAGDVY
DRALPAVDVVELLDRTLVRLTAAGAQVIITSGNHDSAVRLGFASSLLEHGGVHVRTRIQD
IPRPVLLPLGDGAHVAVYGLPYLEPRLVADSLGADAPGHTAVTAAALERARGDLARRRGE
GTVHSIVMAHTFAGGGAPSESERALSVGGLDVVPLEVFGGFDYVALGHLHGRQELAPTIR
YSGSPLAYSFSEARQAKGAWLLDIGPEGIGSVESVGWASGHRLAVLRGPLEELLEAPAHA
GAETAYCHITLTDAERPQRAMERLRARFPLAVALVFEPDGGGRTPVASYSERLAAASSDL
DLCCGFLEHVRGRGPDESERAALGEALEAVRLAEVSR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgccaccggctagcgtcgtccgcatgaagatcctgcacacctccgactggcac
ctgggccggtcgttccacggtgtcggcatgctcgccgcccaggcggagtggctggaccac
ctcgtcgacttcgtggactcggagcgcatcgccgcggtgctcgtagcgggggacgtctac
gaccgcgcgctcccggccgtggacgtcgtcgagctcttggaccggacgctcgtgcgcctc
acggcggccggggcgcaggtcatcatcacgagcggcaaccatgactcggcggtccggctc
ggattcgcctcgagcctcctcgaacacggcggcgtgcacgtgaggacgcgcatccaggac
atcccacggcccgtgctgctgcctctgggggatggagcacacgtggccgtctacgggctc
ccgtacctcgagccccgtctcgtcgcggactccctcggcgcggacgctccaggccacacc
gccgtcacggccgccgccctcgagcgcgcgcggggggacctggcccgccgccgcggcgag
ggcaccgtccactccatcgtgatggcccataccttcgcgggcggcggcgccccgagtgag
agcgagcgggccctgtccgtcggcgggctcgacgtcgtccccctggaggtgttcgggggg
ttcgactacgtggcgctgggccacctgcatggccggcaggagctcgccccgaccatccgg
tactcgggctcgccccttgcctactccttctccgaggcccggcaggccaagggggcgtgg
ctgctcgacatcgggccggagggcatcggttcggtcgagtccgtgggctgggccagcggc
catcggcttgccgtgctgcgcggtcccctcgaggaactgctcgaggcccccgcacatgcc
ggtgccgagacggcctactgccacatcaccctgaccgatgccgaacgcccccagcgcgcc
atggaacggctgcgggcgcggttccccctcgcggtcgccctcgtcttcgagcccgacggc
ggcggccgaacccccgtggcgagctacagcgagcggctcgcggcggccagcagcgacctc
gatctctgctgcggctttcttgagcacgtccgaggccgtggccccgatgagtcagagcgg
gccgcgctgggcgaggcgctcgaggccgtacgccttgcggaggtgtcgcgatga
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