Sinomonas cyclohexanicum: SCMU_26740
Help
Entry
SCMU_26740 CDS
T07918
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccyc
Sinomonas cyclohexanicum
Pathway
ccyc03420
Nucleotide excision repair
ccyc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCMU_26740
03430 Mismatch repair
SCMU_26740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccyc03400
]
SCMU_26740
Enzymes [BR:
ccyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCMU_26740
DNA repair and recombination proteins [BR:
ccyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCMU_26740
MMR (mismatch excision repair)
Other MMR factors
SCMU_26740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
C1_1
Motif
Other DBs
NCBI-ProteinID:
BCT76832
LinkDB
All DBs
Position
complement(2804372..2806498)
Genome browser
AA seq
708 aa
AA seq
DB search
MSEPTTLDTHDGGTLEERLLGGLDDEQREVATTLHGPVCVLAGAGTGKTRAITHRIAYGV
HSGVYSPQRLLAVTFTARAAAEMRSRLRDLGVGGVQARTFHAAALRQLQYFWPQAVGGAL
PGLLEHKAQAIAEGARRLRLTVDRAAIRDLASEIEWAKVSMLTPSTYLEGATGRGEPGGL
QPTTVARLFEAYEDIKVDRNLIDFEDVLLITVGILQEDPKVAATVRDQYRYFVVDEYQDV
SPLQQRLLELWLGGREELCVVGDASQTIYSFTGATSAHLLEFGKHHPDAAMIRLVRDYRS
SPQVVRLANQLLASRRPAGPAADARWAQPLTLMAQRPDGPEPEFAECSDDEAEAAAVARR
ISALVAAGTQPKDIAVLFRTNGQSQAFEQALAAAGIGYQLRGGERFFNRREVRDGMLQLR
GAARAVADDGVPLAQRVRDVLSSLGYSETAPTGGGATRERWESLAALVALADELAAARGE
GFGLTEFVAELQERATAQHAPAVQGVTLASLHAAKGLEWDAVFLVGLSEGLVPISFADTP
VTIDEERRLLYVGITRAREFLHLSWSLSRTPGGRAHRRPSRFLDGLRPAGSSAVHSGGTP
RKRRELKGPTTCRVCGAILSTGAERKVGRCANCPPSYEEATFEALRAWRLERAKESDVPA
FVVFTDATLTAIAEAKPSSLAELAQVAGVGSAKLERYGQAVLELLRDA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccgaccaccctggacacccatgacggcgggacactcgaggagcggctgctc
ggcggtctcgacgacgagcagcgcgaggtcgcgaccaccctccacgggcccgtgtgcgtc
ctggcaggtgccgggacgggcaagacgcgcgccatcacgcaccgcatcgcctatggtgtg
cactccggtgtctactccccgcagcggctgctggccgtgacgttcaccgcgcgcgcggcc
gccgagatgcgcagtcgcctgagggacctcggcgtcggcggcgtgcaggcccgcaccttc
cacgccgcggccctgaggcagctgcagtacttctggccccaggccgtgggcggcgcgctt
cccgggctcctcgagcacaaggcccaggccatcgccgagggcgccaggcgcctgcgcctc
acggtggaccgcgcggccatccgcgacctcgcctcggagatcgagtgggccaaggtctcg
atgctcaccccatccacgtacctcgagggcgccaccggcaggggagagcccggcggcctg
cagccgaccacggtggcgcgccttttcgaggcctacgaggatatcaaggtggaccgcaac
ctcatcgacttcgaggacgtgctgctcatcaccgtggggatcctccaggaggacccgaag
gtcgcggccaccgtgcgcgaccagtaccgctatttcgtggtggacgagtaccaggacgtg
tcgccgctccagcagaggctcctcgaactctggctcggaggcagggaggagctctgcgtg
gtcggcgacgcgagccagaccatctactccttcaccggtgccacgagcgcccacctgctc
gagttcggcaagcaccatccggacgccgcgatgatccgcctcgtccgcgactaccgttcg
agcccgcaggtggtccgcctcgcgaaccagctgctcgcctcccgccggccggccggcccc
gccgccgacgcccggtgggcccagccgctgaccctcatggcgcagcggcccgacggcccg
gagccggagttcgccgaatgctcggacgacgaggcggaggcggccgccgtcgcgcgccgg
atctcagcccttgtcgccgccggcacccagccgaaggacatcgccgtcctcttccgtacg
aacggccagtcccaggcgttcgagcaggccctcgcggccgccgggatcggataccagctg
cggggcggcgagcggttcttcaaccggcgcgaggtgcgcgacggcatgctgcagctgcgc
ggcgccgcgcgtgcggtggcggacgacggcgtgcccctggcgcagcgggtgcgcgacgtc
ctgtcctcgctgggctactccgagacggccccaaccggcggcggagcgaccagggaacgg
tgggagtcgctcgcggcgctcgtggcgctcgccgatgagctggccgcggcccgcggtgag
ggcttcggcctcaccgagttcgtcgcggagctccaggagcgggcgacggcccagcacgcc
cccgccgtgcagggcgtcaccctggcctccctgcacgcagccaaggggcttgagtgggac
gcggtgttcctcgtggggctgagcgagggcctcgtcccgatctcctttgccgacaccccg
gtgacgatcgacgaggagcggcgcctcctgtacgtgggcatcacgcgtgcacgcgagttc
ctgcacctctcgtggtcgctctcccggaccccgggcgggcgcgcgcaccgccgtccgtcg
cggttcctggacgggctccgacccgcagggtcgtccgcggtgcactccgggggtacgccc
cggaagcgccgcgagctcaagggccccaccacgtgccgcgtgtgcggggccatcctctcg
acgggggccgagcggaaggtcggccgctgcgcgaactgcccgccgagctacgaggaggcc
acgttcgaggccctccgggcgtggcggctcgaacgggcaaaggaatcggatgtgcccgcg
ttcgtcgtcttcaccgacgcgaccctgaccgcgatcgccgaggcgaagccctcgagcctg
gccgagctggcgcaggttgcgggcgtcgggagcgccaagctcgaacgctacggccaggcc
gtcctggagctgctccgtgacgcgtga
DBGET
integrated database retrieval system
