Sinomonas cyclohexanicum: SCMU_26770
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Entry
SCMU_26770 CDS
T07918
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccyc
Sinomonas cyclohexanicum
Pathway
ccyc03420
Nucleotide excision repair
ccyc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCMU_26770
03430 Mismatch repair
SCMU_26770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccyc03400
]
SCMU_26770
Enzymes [BR:
ccyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCMU_26770
DNA repair and recombination proteins [BR:
ccyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCMU_26770
MMR (mismatch excision repair)
Other MMR factors
SCMU_26770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BCT76835
LinkDB
All DBs
Position
complement(2808907..2812362)
Genome browser
AA seq
1151 aa
AA seq
DB search
MSTGVSGPEGDLEQGTDGGVERGHADTVGASLRDLPEPRFSPEELADLLGQHRPTPQQSE
IISSPLEPRLVVAGAGSGKTATMADRVVWLVANGWVRPDEILGVTFTRKAAGELSARIRT
QLARLARFARRGVDGIAPSAADPEALDPAVSTYHSFANTVVQDHGLRLGVERDAVLLGPA
QSFQLAARVVEAYDGGTWDRFPAKSTLIAAVTQMAGECAEHLREPAAVAEWLEAEAARLA
ALPPGGRSKAPTKAAGDMLRTLQNRALVGRLAARYAEAKRERGVLDYGDLVSLAARVATT
VPEAGALLRSQYRAVILDEFQDTSHAQLVLFSALFGGGHPVTAVGDPNQSIYGFRGASAG
QLQSFPGRFPRRTHDGALLPASTSHLTTAWRNTMTVLATANIVASPLAHPPTYLAAAGGA
DVRRLEPRPGAGAGRVRVGRFVDERQEAAALADELEGFVRGWPPAAESGPTLAVLCRKRS
QFAPIRAEFDRRGLPYEVVGLGGLLDTPEIVDVVATLRVIADPGRSDALMRLLAGARWRI
GTADLMALADWSRHLAAFRASAARPDEQDLDAPRAQDDVLVEGDLAEAASLVEALDRLPK
EGWTSGAGRTLTPEGRSRLVRLRDELRLLRTVAGDDLGTVISHVEHTLLLDIELAARPAT
SVHEARRNIDAFAEAAASFLAQSNEPGLLAFLAWLDAAANEESGLDMAPREPTPGAIQLL
TVHASKGLEWDAVAVAGLNRGMFPSGGNDRWTSGPSALPWPLRGDRADLPAWDADQPDQK
GWMDAEKLFAEDATEHAEREDRRLAYVAFTRARSLLVATGFAWTSTRSRPMESSPFLDEL
HAAAGEEGFEVIAWTEGADVPEENPLRAEAERSIWPYDPLEGPLDASTGRRRSLTPGRRA
AVEAAAVRVLAELHGLGAAPVPAVGRTAAWSREAELLLAEQARTRSTAGVRLPEHVSAST
LVALGEDRNAVVRQLRRPVPRRPGMAARRGTAFHAWVEEHYGSSAMLDLEGFDSSDEYVD
EAYELGDLVKAFKRTEWADRRPAHVEVPIETRVGPVVVRGRIDAVFRDADGGWELVDWKT
GRAPRGSGARARSVQLAVYRLAWSRLTGAPLESIRAAFCYLADGTVVRPDGLAGEDELEA
LVADALSPGDV
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgggtgtttccggcccagaaggagacctggagcagggcacggacggcggcgtc
gagcgcgggcacgcggacaccgtcggtgcctcgctgcgcgacctgcccgagccgaggttc
agccccgaggaactcgcagaccttctcggccagcaccgccccacgccccagcagtccgag
atcatctcgtccccgctagaaccccggctcgtggtggccggcgcggggtccgggaagacg
gccaccatggccgaccgcgtcgtgtggctcgtggccaatggctgggtgcggccggacgag
atcctcggcgtgaccttcacccggaaggcggccggggagctctccgcgcgcatccggacc
cagctcgcgcgcctggcccggttcgcgcggcgcggcgtcgacggcatcgccccgtccgcg
gccgacccggaggcgctggacccggccgtgtcgacgtaccactcgttcgcgaacacggtg
gtccaggaccacgggctgcggctcggagtcgagcgcgatgccgtgctcctcggccccgcg
cagtccttccagctcgccgcgcgggtagtcgaggcgtacgacggcgggacgtgggaccgc
ttccccgccaagagcaccctcatcgccgccgttacccagatggccggcgagtgcgccgag
cacttgcgtgaacctgcggcggtcgccgagtggctcgaggcggaggcagcccggctcgcg
gccctcccgccgggcggacgctccaaggcgcccaccaaggctgcgggagacatgctgcgg
accctgcagaaccgtgcactcgtgggccgcctcgcggcccggtacgccgaggccaagcgc
gagcgcggcgtccttgactacggagacctcgtctcgctggccgcccgggttgccaccacg
gtcccggaggcgggagcgctgctgcgcagccagtaccgggcggtcatcctcgacgagttc
caggacacgtcccatgcccagctcgtgctgttctccgcgctgttcggcggcgggcatccc
gtcacggcagtcggcgatccgaaccagtccatctacggtttccggggcgcgtcagcggga
cagctgcagagctttccgggcaggttcccccgccggacgcacgacggcgcgctcctcccc
gcgtcgacgtcccacctcacgacggcctggcggaacacgatgacggtgctcgcgaccgcg
aacatcgtcgcctccccgctcgcgcacccgcccacgtacctcgcggcagccgggggcgcg
gacgtccgccggctcgagccccgccccggcgcgggagccgggcgggtgcgcgtcgggcgg
ttcgtcgacgagcgccaggaggccgcagccctcgccgacgagctggagggcttcgtgcgc
gggtggccgcccgccgccgagtccggtcctacactggccgtcctgtgccgcaagcggtcc
cagttcgcgccgatccgcgcggagttcgatcgccggggcctgccgtacgaggtcgtcggc
ctcggaggcctcctcgacacgcccgagatcgtcgacgtcgtggccacgctgcgggtcatc
gccgacccgggccgctccgacgcgctcatgcgcctcctggccggagcacgatggcggatc
ggcaccgcggacctcatggcgctcgcggactggtcacgccacctcgccgccttcagggcc
tcggccgcccgtccggacgagcaggacctcgacgccccgcgcgcccaagacgacgtcctc
gtcgagggcgacctcgccgaggcagcgagcctcgtcgaggcactggacaggctcccgaag
gaggggtggacgtccggggccgggcggacgctcaccccagagggccgctcgcggctggtc
cggctccgtgacgagctgcgcctcctgcgcaccgtggccggcgacgacctcggcacggtc
atctcccacgtcgagcacaccctcctgctggacatcgagctggctgcgcggcctgccacg
tcggtccacgaggcgcgccgcaacatcgatgcgttcgccgaggcggcggcgtcgttcctc
gcccagtcgaacgagccggggctgctcgcgttcctcgcgtggctcgacgccgccgcgaac
gaggaatcggggctcgacatggcgccgagggagcccacgcccggcgcgatccagctgctc
acggtccacgcctccaaggggctcgagtgggacgcggtcgccgtggccggactcaaccgg
gggatgttcccctcgggcggcaacgaccggtggacgagcggcccctcggctctcccgtgg
ccgctgcggggcgaccgcgccgacctccccgcgtgggatgcagaccagcccgaccagaag
ggctggatggatgcggagaagctgttcgccgaggatgccaccgagcatgcggagcgcgag
gaccgccggctggcgtacgtggccttcacccgcgcacggtcgctgctggtggcaacaggg
ttcgcgtggacgagcacccggtcacggccgatggagtcctctccgttcctcgacgagctc
cacgccgccgcgggcgaggagggcttcgaggtcatcgcgtggaccgaaggcgccgacgtc
cccgaggagaaccccctgagggcggaggccgagcgctcgatctggccgtacgatccgctc
gaggggccgctggacgcctcgacgggccggcgtcgcagcctcacacctggacggcgtgct
gccgtcgaggcggcggcggtgcgagtcctcgccgagctccacgggctcggcgccgcgccc
gtgccggccgtgggacgtacggccgcgtggtcacgcgaggccgagctcctcctcgcggaa
caggcgcggacccgctccactgcgggcgtgaggctacccgaacacgtctccgcctcgacc
ctcgtcgccctgggtgaggaccgcaacgcggtggtccgccagctccgccggccagtcccg
cgccgtcccggtatggccgcccggcgcggcaccgccttccacgcctgggtcgaggaacac
tacggctcgagcgcgatgctggacctcgagggcttcgacagctccgacgagtacgtcgac
gaggcgtacgagctcggcgacctcgtgaaggccttcaaacgcaccgaatgggccgaccgc
cggccggcccacgtcgaggtgcccatcgagacccgggtcgggcccgtcgtcgtgcgcggg
cgcatcgacgccgtcttccgcgacgcggacggcggctgggagctcgtggactggaagacg
ggccgggcaccgaggggctccggtgcccgggcgagatcggtgcagctcgccgtgtaccgg
ctggcctggtcgcgactcacgggcgcgccgctcgagtcgatccgcgctgccttctgctac
ctcgcggacgggacagtggtgcgccccgacggcctcgcgggagaggacgagctcgaggcg
ctcgtcgcggacgcgctgagccccggcgatgtgtga
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