Sinomonas cyclohexanicum: SCMU_29290
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Entry
SCMU_29290 CDS
T07918
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
ccyc
Sinomonas cyclohexanicum
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccyc03021
]
SCMU_29290
Transcription machinery [BR:
ccyc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCMU_29290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
HTH_23
Sigma70_r4_2
HTH_Crp_2
HTH_3
HTH_24
MarR_2
HTH_Tnp_4
DUF7343
MarR
HTH_10
HTH_37
HTH_38
HTH_ParB
KORA
Trp_repressor
HTH_IclR
HTH_Tnp_ISL3
HTH_28
HTH_31
HTH_AraC
TrmB
DUF134
Dimerisation
HTH_1
HTH_6
Motif
Other DBs
NCBI-ProteinID:
BCT77087
UniProt:
A0ABM7PXR0
LinkDB
All DBs
Position
complement(3059887..3060606)
Genome browser
AA seq
239 aa
AA seq
DB search
MTTGPISEDAAAAAAHQLVLEYLSLADSMARRFRCPGHDADDLRQVARLALLKAARGYRE
SAGHGFVPYAVPTISGELKRYLRDQSWVARPPRSLQERRLRINALRPRLIQELGHEPTAV
ELGQAAGIPAREVAEAQVAAAAMIGRPIEHGGEASDDPEERRLVMILGGEDPGYEHVEDM
CCLERALEDATDADKRLLHLRFVRDMTQEQIAQELGVSQMQVSRLLRRLLDRLRRRMCA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccggacccatttcagaggatgccgcggctgctgccgcccaccagctcgtgctg
gagtacctcagcctggccgactccatggcccgccgcttccgatgccccggccacgacgcc
gacgacctgcgccaggtcgcgaggctcgccctgctcaaggccgcccggggctacagggaa
tccgcgggacacggattcgtgccctacgcggttcccaccatttccggggaactgaagcgc
tatctgcgcgaccagtcctgggtggcccggcccccgcgctcgctccaggagcgccggctc
cggatcaacgccctgcgaccgcggctgatccaggagctcggccacgagcccacggccgtg
gagctcggccaggcggccgggatccccgcccgcgaggtggccgaggcgcaggtggccgcc
gcggcgatgatcggccgccccatcgagcacggcggcgaggcgtccgacgaccccgaggag
cgtcgcctggtgatgatcctcggtggcgaggatcccggctacgagcacgtggaggacatg
tgctgcctcgagcgcgcgctcgaggacgccaccgacgcggacaagcgcctcctgcacctg
cggttcgtccgggacatgacccaggagcagattgcccaggagctcggcgtcagccagatg
caggtgtcccggctcctgcgccgcctgctcgacaggctgaggcgccggatgtgcgcctga
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integrated database retrieval system
