Sinomonas cyclohexanicum: SCMU_31320
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Entry
SCMU_31320 CDS
T07918
Name
(GenBank) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ccyc
Sinomonas cyclohexanicum
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SCMU_31320
Enzymes [BR:
ccyc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SCMU_31320
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
BCT77290
LinkDB
All DBs
Position
3266047..3268041
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AA seq
664 aa
AA seq
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MTTPIRRRSVLGLMGLAAGAAALPLRSATSASAAPGEEVTLTDNGASVTLANGIVQFTIV
KSTAEIRDLRLIGSTQGNGDMNLLSGSHGHGYTTFNYSGSASAAGMSGAAFRVVSQSADR
IEISVLSNNPARLTFYLDIRIALERGASGLHQYWIAKYPDTMPDGLSFGQLRYAFAADDP
AFRWFVVDDERGIQQRPSLADAAHWTTLQDTTYALPDGSIWSKYQNSSNLEGNNHVFMIS
NGKVGLSLVQASKEAFGGPTRQELTCHDYYSGMILLWHPLTSHYGEPEATPSKGWEKVYG
PFYLHVSEASVGDETANVAALWDDAKRAAAHEAAAWPYAWVSDPAYAAAERSTVSGKLTV
ATLGAVDNGWAVLYQPGPDRQYQGLTLDGDDWQYLNLDYIYSAEIGPDGRFTIPAVRPGT
YTLAAFTKGAMGEYRRAGITVRAGTSVDTGNHVWHPVENGPTLWQIGTPDRSSEEFHVHG
GRDGFRRTLTWLEYPYEFPNGVDFKVGVDDPAKGWNYFHPALRTPGTDAQLSWRGTTPDR
SLETWTIRFDAHRYAGGTGFLDIALAAQVFATLKVTLNGTVISSADPLPGVPGDNASYRL
VARSMYRQIPTITFPAALLRDGENVITLAPAGRPQAPTSDNWMQPMAGIMYDSIRLQVSE
GAAR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccctatccgccgccgcagcgtcctcgggctcatgggactcgccgccggcgcg
gccgcccttcccctcaggtccgcgacctcagcgtcagctgcccccggagaggaagtcact
ctcaccgacaacggggcctcggtgacgctggcgaatggaatcgtccagttcaccatagtg
aaatccaccgcggagatccgcgaccttcgcctcatcggcagcactcagggcaacggcgac
atgaacctgctcagcggttcgcacgggcacggctacacgacattcaactactccggctcg
gcgagtgccgctggcatgtcaggcgccgcattccgcgtggtgagccagtcggccgaccga
atcgagatatcggtcctgtcgaacaacccggccagactgaccttctacttggacatccgc
atcgcactcgagcggggcgcgtccgggctccatcagtactggatcgccaagtaccccgac
acgatgccggatgggctctcgttcggccagctgcgatacgccttcgccgccgacgacccg
gcgttccgctggttcgtcgtcgacgacgaacggggaatccagcagcggccaagcctcgcc
gacgccgcgcactggaccacgctgcaggacacgacatacgcgcttccagacggctcgatc
tggtcgaagtaccagaactcctcgaacctcgaaggcaacaaccacgtcttcatgatctcg
aacggcaaggtgggcctctccctcgtgcaagcgagcaaagaggccttcggggggccgacc
cggcaagaactgacatgccatgactactacagcggcatgatcctgctgtggcaccctctc
accagccactatggggagcctgaggcgacaccgtccaaggggtgggagaaggtctacggg
ccgttctaccttcacgtctccgaggcctcggtcggcgacgagacggcaaatgtcgccgct
ctctgggacgatgcgaagcgcgccgccgcacacgaggccgcggcgtggccgtacgcgtgg
gtctcagatccggcgtatgcggccgccgagcggtccaccgtgtccggcaagctcaccgtc
gccaccctcggcgccgtggacaacggctgggccgtgctctatcagcccggcccagaccgt
cagtaccagggcctgaccctcgacggcgacgactggcagtacctgaatctggactacatc
tactccgccgagatcggccccgacggccgcttcacgatccccgcggtacgcccgggtacc
tacacgcttgcggccttcaccaagggcgccatgggcgagtaccggcgcgcagggatcacc
gtccgcgctgggacatccgtcgacaccggcaaccacgtgtggcatccggtcgagaacggg
ccaaccctgtggcagatcggcactccggaccgctcctccgaggagttccatgtccacggc
gggcgggacggcttccggcggaccctgacatggctcgagtacccttacgagttccccaac
ggcgtcgacttcaaggtcggggtcgatgaccccgcgaagggctggaactacttccacccg
gccctcaggacaccgggcacggatgctcagctctcctggcgcggcacgaccccggaccgc
agcctcgagacgtggacgatccgattcgacgcacaccgctatgcgggcggaacggggttt
ctcgacatcgcgctcgcggcccaggtgttcgcgaccctgaaggtgacactgaacggcacc
gtcatctcctcggcggacccccttcccggggtgcccggcgacaatgcctcgtaccgtctt
gtcgcgcggtccatgtaccgccagattccgacgatcaccttccccgctgcgctcctgcgc
gacggcgagaacgtgatcacacttgcccccgcggggagaccccaggcgccgacctccgac
aattggatgcagccgatggccgggatcatgtacgactcgatcaggctccaggtgagcgag
ggggccgcacggtag
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