Sinomonas cyclohexanicum: SCMU_36780
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Entry
SCMU_36780 CDS
T07918
Name
(GenBank) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccyc
Sinomonas cyclohexanicum
Pathway
ccyc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SCMU_36780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccyc03019
]
SCMU_36780
03009 Ribosome biogenesis [BR:
ccyc03009
]
SCMU_36780
04131 Membrane trafficking [BR:
ccyc04131
]
SCMU_36780
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccyc04147
]
SCMU_36780
Messenger RNA biogenesis [BR:
ccyc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SCMU_36780
Ribosome biogenesis [BR:
ccyc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SCMU_36780
Membrane trafficking [BR:
ccyc04131
]
SNARE
SNARE associated proteins
Others
SCMU_36780
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SCMU_36780
Exosome [BR:
ccyc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCMU_36780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
AAA_lid_3
Acetyltransf_7
Acetyltransf_10
AAA_5
AAA_28
AAA_16
AAA_2
AAA_22
AAA_14
RuvB_N
AAA_17
NACHT
FR47
Acetyltransf_9
RNA_helicase
Mg_chelatase
AAA_33
AAA_24
AAA_18
TIP49
TsaE
nSTAND3
ABC_tran
Acetyltransf_6
SKI
ATPase_2
Sigma54_activat
GNAT_acetyltran
AAA_19
bpMoxR
IstB_IS21
IDM1_C
AAA_30
KTI12
Cytidylate_kin
Parvo_NS1
NTPase_1
AAA_11
VapE-like_dom
DO-GTPase1
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BCT77836
LinkDB
All DBs
Position
complement(3881965..3883311)
Genome browser
AA seq
448 aa
AA seq
DB search
MTTWRIRDFHPSDLDGILHLWTAMTDSGIEPVYSLSEVLASCQKDVAVVALHGDDVVGAA
VGRAAHEQGWIVFVATLPEWRSRGIGTALLAALENRMAPLGLTKLSAIMPDTETRVDAFT
ARGFKDVQNLRFFERQIPVQRTELEPLAQLGGRVLPRDLWDRVAGMKREKQLLERRLVLP
LAEAELADEFGVVPPRAVVLFGPPGTGKTTFAKAIASRLEWPFVEVFPSRLAGDAEGLAG
ALRRTFTEIAELEHAVVFLDEVEEIASHRAGDPPSPNQGVTNELLKIIPAFREQSGRLLV
CATNFIRALDSAFLRHGRFDYVIPIGLPDAEARRSMWERFIPEAVLPEVDVEELVARTEG
FSPADIEFAARSASQRALEKAVYTGDAAATDTAHDGGSPAAARRSAESPARRGPTTEDYL
EAIGETKTTVSDEVAAAFLEDIEELARA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttggcggatcagggatttccacccgtcggacctggacgggatcctgcacctg
tggaccgccatgacggactcggggatcgagccggtgtactcgctgtccgaggtgctcgcg
agctgccagaaggacgtggccgtcgtggcgctgcacggcgacgacgtggtgggcgccgcg
gtgggccgggcggcgcatgagcaggggtggatcgtgttcgtggcgaccctgccggagtgg
cgctcgcgcgggatcggcacggcgctgctcgcggccctcgagaaccggatggcgcccctg
ggcctcacgaagctctcggccatcatgccggacacggagacgcgcgtcgacgccttcacg
gcgcgcggcttcaaggacgtgcagaacctgcgcttcttcgaacgccagatcccggtccag
cgcaccgagctcgagccgctcgcccagctgggcggccgggtgctgccccgggacctgtgg
gacagggtggcgggcatgaagcgcgagaagcagctgctcgagcgccggctcgtcctgccg
ctcgccgaggcagagctcgcggacgagttcggggtggtgccgccgcgcgccgtcgtgctg
ttcggcccgcccgggaccggcaagacgacgttcgccaaggcgattgcctcgcggctcgag
tggccgttcgtggaggtgttcccgtcccgcctggccggggacgcggagggcctcgcgggc
gcgctgcgccggacgttcacggagatcgccgagctcgagcacgcggtcgtgttcctcgat
gaggtcgaggagatcgcctcgcaccgcgccggcgacccgccgagccccaaccagggcgtc
acgaacgagctgctcaagatcatccccgcgttccgcgagcagtcgggcaggctccttgtg
tgcgcgacgaacttcatccgtgccctcgactcggcgttcctgcggcacggccgcttcgac
tacgtcatcccgatcgggctcccggacgccgaggcccgccggtccatgtgggagcggttc
atccccgaggccgtgctgccagaggtcgacgtggaggagctcgtggcacgcacagagggc
ttctcgccggcggacatcgagttcgcagcgcgttccgcgtcgcagcgcgcgctcgagaag
gcggtgtacaccggggatgcggccgcgacagacacggcgcacgacggcgggtccccggcc
gccgccagacgctccgccgagagccctgcccgccgcgggcccaccacggaggactacctc
gaggcgatcggcgagacgaagacgaccgtgagcgacgaggtcgcggcggcgttcctcgag
gacatcgaggagctcgccagggcctga
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