Capnocytophaga cynodegmi: CGC48_01110
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Entry
CGC48_01110 CDS
T05499
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ccyn
Capnocytophaga cynodegmi
Pathway
ccyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGC48_01110 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccyn03400
]
CGC48_01110 (priA)
Enzymes [BR:
ccyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC48_01110 (priA)
DNA repair and recombination proteins [BR:
ccyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGC48_01110 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Zn_ribbon_PriA
ResIII
Helicase_C
PriA_C
nSTAND3
TrmB
Zn_Ribbon_YjdM
Zn_ribbon_6
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ATA67343
UniProt:
A0A286NTI4
LinkDB
All DBs
Position
complement(233405..235855)
Genome browser
AA seq
816 aa
AA seq
DB search
MSYFVDVILPIPLRKLFTYGVNQDEAHFLKSGMRVAVSFGKSKVYTALVFQVHTNQPTYQ
TKDIEYILDETPVVNQLQLQHWQWISEFYMCSLGEVFKMAMPSSFLLESETIIEKSSREL
EINELTDDELLVYEALNFKTALTGNEVAKIVGNKKALKVLKGLVDKNAIKISEKIFEKYV
PKLVKYIRLSSEYQSDEGIKKAFDILSKATKQKQLIVAYFNCINKEKGVLKAEKLLSQAN
VSASVLKSVVEKGIFEEYFIQKDRINFTGDLYEKKILSDAQQESFLEIQNQFQEKEVVLF
QGVTASGKTEIYIELIDQVLKSGKQVLYLLPEIGLTVHLINRLKKYFGDKMGVYHSKYTT
NERVEVWNNVLNGNTKNQLVVGVRSSVFLPFSNLGLVIVDEEHDTSYRQFEPAPRFHTRD
AAIVLSKIHKANVLLGSATPSLESLYNAKREKYGYVYLSKRFGDFQVPDIEIIDIKDKHF
RKQMTGHFSDVLIEEIGKTLQQGNQVILFQNQRGYAPVIQCRSCATVPQCPHCDVSLTYH
QGRNQLRCHYCGYAIAKPEVCIACGSTDLITKGVGTEQIAKELTELFPDVTIDRMDQDTT
SGKYGYEKILSKFEQRETQILVGTQMISKGLDFENVGLVGVMNADSFIHFPDFRAYERSF
QLLVQISGRAGRSSKKGKVLIQTYSPKHPVLQQVLHNNFKEMFQSQIKERKEFHYPPFVR
LIKITFKHSDFNKVNEGAQWFAEALRQGFSQQQLLQVLGPEFPLVSRIRNEYIKDILVKI
PPEISVESVKKYILRTEISFQSIANFRSVRVIFNVE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcttattttgttgatgtaattcttccaattcctcttcggaaattgtttacctatggt
gtgaatcaagatgaggcacattttttaaaatcaggaatgcgagttgctgtatctttcggt
aaatcaaaggtttatactgctttagtttttcaagtacatactaatcagccaacatatcaa
actaaggatattgaatatatcttagatgaaactcctgttgtaaatcagttgcaattacag
cattggcaatggatttccgaattttatatgtgttcactgggcgaggtttttaaaatggca
atgccttcttcttttttgttggaaagtgaaacaatcatcgaaaagagttccagagaattg
gaaattaatgaattaacagatgatgaattgttggtttatgaagctctgaattttaaaact
gcattaacaggaaatgaagttgctaagatagtaggaaataaaaaagccttgaaagttctg
aaagggctagtggacaaaaatgcaataaaaatttccgaaaaaatatttgaaaagtatgtc
ccaaagttagtgaagtatattagattatcttctgaatatcaatctgatgaaggaataaaa
aaagcttttgacattctctcgaaagcaacgaaacaaaaacaacttatcgttgcgtatttc
aattgtattaataaagaaaaaggagttttaaaagctgaaaaattactttcacaagcaaat
gtttctgcgagtgttttaaagtctgtggttgaaaaaggaatttttgaagaatattttatt
caaaaagaccgcatcaatttcactggagatttgtacgaaaaaaaaatattgagtgatgct
caacaagaatcttttcttgaaattcaaaatcagtttcaggaaaaagaggttgttcttttt
caaggagttacagcttcaggaaaaacagaaatttacattgagcttattgaccaagtgtta
aaatcaggaaaacaagttctttacttgcttcctgaaatagggcttacggtgcatttaatc
aatagattaaagaaatattttggagataaaatgggggtttatcattccaaatatacaact
aatgagcgggttgaagtctggaataatgtcctgaacggaaatactaaaaatcagcttgtt
gtgggagttcgttcatctgtctttttgcctttttcaaacttaggattagttattgttgat
gaagaacacgatacttcttaccgccaatttgaaccagctccgcgttttcatactcgtgat
gcggcaatagttctgtctaaaatacataaagccaacgtgttattggggtcagcaactcct
tcattggagagtctttacaatgcaaagcgagaaaaatacggatatgtatatctttcaaag
cgttttggtgactttcaagttcctgatatcgaaataattgatattaaagataagcatttt
agaaaacaaatgacagggcatttttctgatgtgcttatcgaagaaattgggaagacactt
caacagggaaatcaagttatattatttcaaaatcagagaggctatgctcctgtaattcaa
tgtagatcgtgtgcgacagtacctcaatgtcctcattgtgatgttagtttaacgtatcat
caaggaagaaatcaattgcgatgccactactgcggttatgctatagcaaaacctgaggtt
tgtatagcttgtggaagtacagatttaataacaaaaggcgttggaacagagcaaattgca
aaagaacttacagaattattccctgatgtgaccattgatagaatggatcaagatactacc
agcggaaaatacggctatgaaaaaatattatcaaagtttgaacagcgagaaacacaaatt
ttggtaggaacacaaatgattagcaaaggtttagattttgaaaatgttgggttggtaggt
gttatgaatgccgattcatttattcattttccagatttcagagcttatgagcgtagtttt
cagttattggtacaaatatcgggtagggcagggcgtagttccaaaaaaggaaaagtttta
attcagacgtatagtccgaaacatcctgttttgcaacaagttttacacaataattttaag
gaaatgttccaaagtcaaattaaggaacgtaaagaatttcattatcctcctttcgttcga
ttaattaaaataacgttcaaacattctgactttaataaagtaaatgaaggagcgcagtgg
tttgcagaggcactacgtcaagggttctcgcagcaacaacttttgcaagtgttgggacct
gaatttccgttagtttctcgcattcgaaatgagtatataaaggatattttagtgaaaatt
ccgccagaaatttccgttgaaagtgtaaaaaaatatattttgaggacagaaatcagcttt
cagtctattgctaattttaggtctgttcgagtaattttcaatgttgaataa
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