Capnocytophaga cynodegmi: CGC48_01230
Help
Entry
CGC48_01230 CDS
T05499
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccyn
Capnocytophaga cynodegmi
Pathway
ccyn03030
DNA replication
ccyn03430
Mismatch repair
ccyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC48_01230
03430 Mismatch repair
CGC48_01230
03440 Homologous recombination
CGC48_01230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccyn03032
]
CGC48_01230
03400 DNA repair and recombination proteins [BR:
ccyn03400
]
CGC48_01230
Enzymes [BR:
ccyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC48_01230
DNA replication proteins [BR:
ccyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC48_01230
DNA repair and recombination proteins [BR:
ccyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC48_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DNA_pol_B_exo1
TRCF
TMEM95
T4_Spackle
Motif
Other DBs
NCBI-ProteinID:
ATA67365
UniProt:
A0A250E6K5
LinkDB
All DBs
Position
255150..255917
Genome browser
AA seq
255 aa
AA seq
DB search
MELKLSKPICFFDLETTGTDITKDRIVEISILKVYPNGNKESKTWLVNPTIPIPKGASDV
HGITNERVANEPTFKELAKTIHNMIKDSDLAGYNSDRFDIPLLAEEMLRADVDFDLGNRV
TVDVQTIFHKMEQRTLSAAYKFYCGKTLDNAHSAAADTNATYEILKSQLDRYGELENDMK
KLSEFTTRKQAVDFAGFIALNDKNETIFTFGKHKGRKVEEILEEEPGYFGWILNADFPLY
TKKVLTAIKLKGFSK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggaactaaaactatcaaaaccgatttgtttcttcgatttggaaaccactggaactgac
attactaaagaccgcattgttgaaatctctatactaaaagtatatcccaatgggaataaa
gaaagtaaaacgtggttggtaaatcctacaattccgatacccaaaggagcaagtgatgta
cacggaattaccaacgaacgcgtagccaacgaacccactttcaaggaacttgccaaaacc
attcataatatgattaaagattcggacttggcgggttacaattccgaccgcttcgatatt
cctcttttagcggaagaaatgctccgtgccgacgtcgatttcgatttaggaaaccgcgta
acggtagatgtacaaaccatcttccacaaaatggaacaacgtactcttagtgctgcttat
aagttctactgcggaaaaacgctggacaatgcgcactcggcagcagcggacactaatgcc
acctatgagatactaaaatcacaactcgaccgatacggcgaactcgaaaacgatatgaaa
aaactcagcgagttcaccactcgaaaacaagcggtggactttgccggatttattgccctg
aacgacaaaaacgaaaccattttcaccttcggaaagcacaaaggcagaaaagtagaagaa
atactggaagaagaacctggttacttcggctggattttaaatgctgactttccgctgtac
accaaaaaggtactaactgccatcaaactaaaaggattttcaaaataa
DBGET
integrated database retrieval system
