Capnocytophaga cynodegmi: CGC48_01520
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Entry
CGC48_01520 CDS
T05499
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccyn
Capnocytophaga cynodegmi
Pathway
ccyn03030
DNA replication
ccyn03430
Mismatch repair
ccyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC48_01520
03430 Mismatch repair
CGC48_01520
03440 Homologous recombination
CGC48_01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccyn03032
]
CGC48_01520
03400 DNA repair and recombination proteins [BR:
ccyn03400
]
CGC48_01520
Enzymes [BR:
ccyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC48_01520
DNA replication proteins [BR:
ccyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC48_01520
DNA repair and recombination proteins [BR:
ccyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC48_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Arc1p_N_like
FapA_N
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
ATA67419
UniProt:
A0A286NTM8
LinkDB
All DBs
Position
309269..313729
Genome browser
AA seq
1486 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDSDNWPRAVQIAWQLHDRHGKLIEHKDFLITPDDFNIPY
DAEKVHGISTELAQQQGVSIQKVFEEFNEALKKSTYVVGQNIGFDINIMGAEFHRYGVDS
PLVNMPVLDTCTEITAELCKIPGGRGGRYKLPTLTELHEFLFNVPFAEAHNATADVEATT
RCFFELIRIGQGFETKDISAEYITEFQQHNTTEIQPFGLKHINLKKASEEIRKEIQKQSR
SGLSQQELNANIALLEKAPFAHLHNHTQFSVLQATTSIQSLVKKTIQEKMPAVAMTDSGN
MMGAFHFIKEVLGHNKSAKAKNDEAIEKGETPSEIEIKPIVGCEFNVCENHLDKSHQDNG
YQVVMLAKNKNGYHNLAKMASIAYTDGYYYVPRIDRNIIEKYKKNLIVLTGGMNGEVPSK
VLNIGEKQAETALLWWKNLFGEDLYIELMRHNQEDENRVNQVLIELSKKHQVKLVATNNT
FYINQKDANAHDILLCVKDGEKQATPIGRGRGYRFGMPNQEYYYKSAEQMKTLFKDVPEA
ILNIQEIIDKIEIYNLAREVLLPKFQIPDEFLVEDDPDGKKGENKYLRHLTYLGAEKRYK
LPLSEEVIERLDFELMIIEKTGYPGYFLIVQDFIAAAREMGVSVGPGRGSAAGSAVAYCL
GITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSLVMDYVINKYGKNQVAQIITYG
TMAAKSSIRDTARVLDLPLHESDRIAKLVPNMKLAKIFSMDDKQLKEKLRSDELPKVNEL
KQIAEGTDLAAETLQQAQVLEGSVRNTGIHACGVIITPDDITNFVPVSVAKDSDLFVTQF
DNSVVESAGLLKMDFLGLKTLTLIKDSVELIKRRNGIEINPDEIPIDDKKTYELFQRGET
VGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIKRKHGTEPIVYDLDA
MEEYLKETYGITVYQEQVMLLSQKLAGFSKGDADMLRKAMGKKIFALLEKLKPKFVEGGI
KNGHPADILEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKANYPAEFMAAVLSNNMN
DIKQVSFFLEECQRMGIKVLSPDVNESFYKFTVNKDGNIRFGMGAIKGVGKNAVETIVDS
RKDGNYTSIFDVTRRVDFRNINKKAFENIALAGGFDSFTKVHRAQYFHDEGDGIVFLEKA
IRYGNKYQENKNSPQMSLFGESSGVEIPEPTIPNCESWGNLEQLRREKEVVGIYISGHPL
DDFKHSLDNFCNLSLTQLQDLSPLINREISIAGMITDVQHRTSKNGKGWASFILEDYEGS
HEFRLFNDDYLKFRNYLILGTFLYCKFVVKEGWQKKDSNEKAEPRVQFTMIMQLQDVLAS
LAKKIALHLNIKDISTDLIENYKNIIEKHQGNYPITFIVHNMEENIHLNMDNGQLKVDIS
KEFLEELDQKSVSYVLNDRKMEKLITKKKEEVEEEEQLEVELIDEN
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgataccgaaaccacaggtttaccaaaacgttgggacgcacctatc
acagattcagataattggcctcgtgccgtacagattgcttggcagttgcacgaccgacat
ggaaaactcatcgaacataaagattttctcatcacacctgatgattttaacattccgtac
gatgctgaaaaagtacacggaatatccaccgaattagctcaacaacaaggagtttcaatt
caaaaagtattcgaagagtttaatgaagctctaaaaaaatcaacttatgtggtggggcaa
aatattgggtttgatatcaatattatgggtgccgaatttcatcgctatggtgttgatagt
ccacttgttaatatgcccgttttggatacttgtaccgaaatcacagcagaactctgcaag
atacctgggggacgtggtggtcgttataaattacctacactcaccgagttacacgaattt
ctgttcaatgttccttttgcagaagcacataatgccactgccgacgtggaagcaactacc
cgttgtttctttgaattgatacgcatcggacaaggatttgaaacaaaagatatttcagct
gaatacattactgaatttcaacaacataacacaaccgaaattcaaccctttgggctaaaa
cacatcaacctgaaaaaggcttcggaagaaattcgtaaagaaattcaaaagcaatcaaga
agcggattaagtcagcaagagcttaatgcaaatatcgccttgttggaaaaagctccgttt
gctcatttgcacaatcatacacaattctctgtactacaagccactacatctatacaaagt
ttggtaaagaaaaccattcaggagaaaatgcctgcagtagcaatgaccgatagcggaaat
atgatgggggcctttcatttcatcaaggaagttttggggcacaacaaatccgccaaagcc
aaaaatgatgaagctatcgaaaagggcgaaactccttccgaaatcgaaattaaacccatt
gtaggttgcgaatttaatgtctgtgaaaatcatttagacaaaagccatcaagacaatggt
taccaagttgttatgttagctaaaaataaaaatggctatcacaatttggcaaaaatggct
tccattgcttataccgatggctattattacgtaccgagaattgacagaaatatcattgaa
aaatataaaaaaaacctcatcgtattaactggtggaatgaatggcgaagttccgtccaaa
gtactgaatatcggagagaaacaagccgaaacagcattactttggtggaaaaatcttttc
ggtgaagacctttacatcgaactgatgcgacacaatcaagaagatgaaaatcgtgtcaat
caagtacttatagaactatccaaaaaacatcaagtaaagctcgtagccacgaataacaca
ttctatatcaaccagaaagatgccaacgcacacgatattttgctgtgtgtaaaggacgga
gaaaaacaggcaactcccatcggaagaggtcgcggatatcgcttcggaatgcccaatcag
gaatattattacaagtccgccgagcaaatgaaaactttgtttaaggacgttcctgaagcc
attttaaatattcaagaaatcatcgataaaattgagatttataacttggctcgagaggtt
ttgttgccaaaatttcaaattccagacgagtttctggtagaagatgaccctgacggaaaa
aaaggagaaaacaaatatctccgacatctgacttatctcggagcagaaaaacgttacaaa
cttcctctttctgaagaagttattgagcgattggattttgaattgatgattattgaaaaa
acaggatatcctgggtattttcttattgttcaggactttatcgcagcagctcgtgaaatg
ggtgtttctgtaggaccaggaaggggttcagcggcaggttcggcagtagcttattgcctc
ggaatcacgaatatagacccaatcaaatacgatttactttttgagcgttttctcaacccc
gaccgcgtaagtatgcccgatattgatattgacttcgatgacgaaggacgctcattagta
atggattatgttatcaacaagtacggaaaaaatcaggtggctcaaatcataacctacgga
acgatggcggcgaaatcttccattcgggataccgctcgtgtactggatttacctttgcac
gagtccgacagaattgccaagctcgtgccaaatatgaaattggcaaagattttcagtatg
gacgacaaacagctgaaagaaaagctacgttccgacgagctaccaaaagtaaacgaactc
aaacaaatagccgaaggtacggatttggctgccgaaacgctgcaacaagctcaagttctg
gaaggttctgttcgcaatacgggaattcacgcctgtggcgttattatcactcctgatgat
attaccaattttgtgcctgtttcagtcgctaaagattcggatttatttgttactcagttt
gataactccgttgtggaaagtgctggactgctaaaaatggactttttagggcttaaaaca
ctcaccctgattaaagattctgtcgaacttataaaaagacgaaatggcatagaaatcaat
cctgatgaaattccgattgatgacaaaaaaacgtacgagcttttccaacgtggtgaaact
gtggggattttccaatacgagtcgcctggaatgcaaaaatatatgcgagagctgaaacct
actgtttttgctgatttaattgctatgaacgccctatacagaccaggtcccttggagtac
attccgagttttatcaaacggaaacacggcacggaacccattgtgtatgaccttgatgca
atggaagaatatctcaaagaaacttacggaattacggtatatcaggaacaagtaatgtta
ctttctcagaagttggctggtttttccaaaggtgatgccgatatgcttcgtaaagcgatg
ggaaaaaagattttcgccttgcttgaaaaactaaaacctaaatttgtggaagggggcatc
aaaaatgggcatcctgcggatattttagaaaaaatttggaaggactgggaagcctttgca
agttatgcttttaacaaatcgcactccacttgttatgcttggattgcctaccaaactgca
tatttgaaagccaactatcctgctgaatttatggcggcggtactctccaataatatgaac
gatattaagcaagtttcgttctttttggaagaatgtcaacgtatgggaatcaaagtgtta
agccctgatgtaaatgaatcgttttataaatttaccgtaaataaagacggaaacattcgc
tttggaatgggagctatcaaaggggttggaaaaaatgcagtagaaaccattgttgatagc
cgaaaagatggaaattatacttctatttttgatgtaaccagacgcgtagatttcagaaat
attaacaaaaaagcctttgaaaacatagctctggcaggtggatttgattcttttaccaaa
gtgcatcgagctcaatattttcacgatgaaggcgatgggattgtctttttagaaaaagct
atccgctatggcaataaatatcaagaaaacaaaaactccccccaaatgagtctattcgga
gaaagttcgggagttgaaattcctgaacctaccattccgaattgtgaaagttggggaaat
ttggaacaattacgtcgtgaaaaagaagttgtgggaatttacatttcagggcatccgtta
gatgattttaaacattcattggacaatttctgcaatttatcacttacacaattacaagac
ctttctcccttgattaacagagaaataagtattgctggaatgattaccgatgtccagcat
cgtacctctaaaaacggaaaaggttgggcgtcatttattttggaagattatgaaggatcg
cacgaattcagattatttaatgatgattatttaaaatttcgtaactacctcattttaggc
acttttctgtattgtaaatttgtagtcaaagaaggttggcagaagaaagatagtaacgaa
aaggcagaacctcgcgttcagtttacaatgataatgcaattacaagatgtactcgctagt
ttagcaaaaaaaatcgctttacatctaaatattaaagatatttcaacagatttaattgaa
aattataaaaatatcattgaaaaacatcaaggaaattatccaattacgttcattgtacac
aatatggaagaaaatatacatctaaatatggacaatggacagctgaaagtcgatatttca
aaagaatttcttgaagaactagaccaaaaatcggtttcatacgtcttgaatgaccgaaaa
atggagaaattgattaccaaaaagaaagaggaagtcgaagaagaagaacaattagaagtt
gaattaatcgacgaaaattaa
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integrated database retrieval system
