Capnocytophaga cynodegmi: CGC48_03295
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Entry
CGC48_03295 CDS
T05499
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ccyn
Capnocytophaga cynodegmi
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccyn03009
]
CGC48_03295 (rimO)
Enzymes [BR:
ccyn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CGC48_03295 (rimO)
Ribosome biogenesis [BR:
ccyn03009
]
Prokaryotic type
ribosomal protein modification factors
CGC48_03295 (rimO)
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ATA67740
UniProt:
A0A250E4F9
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All DBs
Position
complement(719683..720984)
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AA seq
433 aa
AA seq
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MRTKSIKKNVINVVTLGCSKNVYDSEVLMGQLKAGGKDVVHEKEGNIVVINTCGFINNAK
EESINTILDYVNKKEEGLVDKVYVMGCLSERYKPDLEKEIPDVDQYFGTTELPALLKVLG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHRSTPIEDLVIEAEKLA
TKGVKELILIAQDLTYYGLDLYKERKLADLLRELVKVEGIEWIRLHYAFPTGFPMDVIEV
MKEESKVCNYLDIPLQHISDSILKSMRRGTTREKTIKLLKKFREKLPEMAIRTTLIVGYP
GETEDDFNILKEFVKEMRFDRLGCFTYSHEENTHAYNLVDDVPEEVKIARANEIMEIQSQ
ISWELNQEKIGKIFRCLIDRKEGNYFIGRTEYDSPDVDNEVLIDAKRFYVKAGEFVNVKV
IDAADYDLYAEPV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaagtcaataaagaaaaatgtcatcaatgtagttactctggggtgttccaaa
aatgtgtatgatagtgaggttttaatggggcaactaaaagcaggaggtaaagatgttgtt
cacgaaaaggaaggtaatatcgtggttatcaatacctgtggttttatcaataatgccaaa
gaggaaagcattaataccattttagattatgtaaacaaaaaagaagaaggtttggttgat
aaggtttatgtaatgggttgtttgagtgagcgttacaagcctgatttggaaaaagaaatc
cctgacgtcgaccaatatttcggaactactgaacttcctgctttgctgaaagttttagga
gctgattacaagcacgaacttatcggtgagcgacttacaacaactcctaaaaattatgct
tacctaaaaatagctgaaggttgcgatcgtccttgtagtttttgtgctattccgctgatg
cgtggaagccaccgaagtacccctattgaagatttggttatcgaagctgaaaaattggct
acaaaaggagtcaaagaattgattttgatagctcaagatttaacatattatgggttagac
ctttataaagaaagaaaattagccgatttgttacgtgagcttgtcaaggtagagggaatt
gagtggattcgattacattatgctttcccgacaggtttcccgatggacgttatcgaagtg
atgaaagaggaatcaaaagtttgtaattacttggacattcctttgcaacacatttcagat
tctattctgaaaagtatgagacgtggaacaactcgggagaaaacgataaaattactcaaa
aaatttcgagaaaaattaccagaaatggcgattcgaactactttgattgtcggctatcct
ggtgaaactgaagatgatttcaatattctcaaagaatttgtaaaagaaatgcgattcgac
cgattgggttgttttacgtacagtcacgaggagaatacacacgcttataacttggtcgat
gatgttcccgaggaagtgaaaatagctagagctaatgaaataatggaaattcagtctcag
atttcgtgggaactcaatcaagagaaaattggtaaaatattccgttgtcttatcgaccgc
aaagaaggaaattatttcataggacgcactgaatatgattctcctgatgttgataatgag
gtacttattgatgctaagaggttttatgtgaaagcaggtgaatttgttaacgttaaagtt
atcgatgcagcagattatgatttgtatgccgaacctgtgtaa
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