Capnocytophaga cynodegmi: CGC48_03940
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Entry
CGC48_03940 CDS
T05499
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccyn
Capnocytophaga cynodegmi
Pathway
ccyn03030
DNA replication
ccyn03410
Base excision repair
ccyn03420
Nucleotide excision repair
ccyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC48_03940
03410 Base excision repair
CGC48_03940
03420 Nucleotide excision repair
CGC48_03940
03440 Homologous recombination
CGC48_03940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccyn03032
]
CGC48_03940
03400 DNA repair and recombination proteins [BR:
ccyn03400
]
CGC48_03940
Enzymes [BR:
ccyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC48_03940
DNA replication proteins [BR:
ccyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CGC48_03940
DNA repair and recombination proteins [BR:
ccyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CGC48_03940
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC48_03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
Pro-kuma_activ
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ATA69268
UniProt:
A0A250EBZ2
LinkDB
All DBs
Position
complement(853486..856275)
Genome browser
AA seq
929 aa
AA seq
DB search
MKKKLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAIMGFMNSLFDVIKKERPDHLAVAF
DKGGSVARTEMFTDYKANREETPEAIRIAVPYIHEILKALHIPIIEKEGYEADDIIGTLA
KKAEKQNYLVYMVTPDKDYAQLVSENIFVYRPPRNGNDVEIWGVEQVKEKFEVQSPEQVI
DFLGMMGDAVDNIPGLPGVGEKTAKKLLAEFGSMENLLTNTDKLKGKMKENIENNAEKGI
LSKKLATIMLDVPVEFDEVDFELSKPDFESVAKLFEELEFRQLLQNFMRTYQPPEIVVQK
SKSVEGQTDLFAVQGNLFAENLSSGKKTIEDTPHHYQLAETAMARRLLLQNLLQQEAVCF
DTETTNLESLNAELVGIAFSWHKGKGYYVPFPENRSEASELLQEFRPFFENEQITKVGQN
LKYDIKVLYNYGIEVKGELFDTMVAHYLINPDMRHNMDVLSETYLDYTPISIEKLIGKKG
KNQLSMRSVSLEDQKEYAVEDADVTWQLKEIFTEELKKVNADKIYRELEAPLVQVLAKME
LEGINLDTSFLKRLSEKLDEDIIAYEKEILTAAGEDFNLASPKQLGEILFEKLKIDKKPK
KTKTGQYATSEEVLSYFADKHKIVADILEWRQLQKLKSTYIDALPNEVNPKTGRVHTTYM
QTVAATGRLSSNNPNLQNIPIRTERGQQIRKAFIPKDENHILLAADYSQIELRIIASLSE
EQNMIQAFLNNEDIHRSTAAKVFNVPIEEVTREQRSHAKTINFGIIYGVSAFGLSNQTDL
SRTESKELIETYYATYPNLRNYINKQIFFAQQNGYVETILGRRRYLPDINSRNQVVKGAA
ERNAINAPIQGSAADIIKIAMIRVQNRLEKESFKSKMLLQVHDELVFDVPKIELEEVKNA
IKYEMENAFKLIVPLVVDLGVGTNWLEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagaaacttttccttttagatgcgtatgctttgatattcagaggatattatgct
tttattaaaaatccgagaattaattcaaaagggttgaacacttcggcgataatgggtttt
atgaactctctttttgatgtgattaaaaaagaaagacctgaccatctggctgttgccttt
gacaaaggtggaagtgtggctcgtacggaaatgttcacggattacaaagctaatcgagaa
gaaactcccgaagctattcgcattgcagtgccttacattcacgaaatactaaaggctttg
cacattcctatcattgaaaaggaaggttatgaagctgatgatattattggtacacttgcc
aaaaaggccgaaaagcagaattatttggtgtatatggttactccagataaagattatgca
caattagtttctgaaaatatttttgtttatcgtcctcctcgtaatggaaatgatgttgag
atttggggagtggagcaggtcaaagaaaagtttgaagtacaatcacccgagcaagtgatt
gattttcttggaatgatgggcgatgctgttgataatattcctggacttcctggagtgggt
gagaagacagctaaaaaacttctggcagagttcggaagtatggaaaatctgttgacaaat
acagataagctcaaaggaaagatgaaagagaacatcgaaaataatgctgaaaaaggaatt
ttgtccaaaaaattggcaaccattatgttagatgttcctgttgagtttgatgaagttgat
tttgaactttcaaaacctgactttgagtctgtcgcaaaactttttgaagaattggaattc
aggcaattgcttcagaattttatgcgtacgtaccaacctcctgaaatagtggttcaaaaa
tcaaaatcagtggaaggtcaaacagatttatttgcagtacaaggtaatttatttgcagaa
aatctatcttctggtaaaaaaactattgaagatacgcctcatcattaccaattggcggag
acagcaatggctcgtaggcttttacttcaaaatttattgcaacaagaagcagtttgtttt
gatacagaaacaactaatcttgaaagtttgaatgctgaattggttggaattgctttttca
tggcataaaggtaaaggatattacgttccgtttcctgaaaataggtcagaagcctctgaa
ttattgcaagaatttcgtcctttttttgaaaatgagcaaattacaaaggtagggcaaaat
ctaaaatatgatataaaagtattgtacaattatggaatagaggtaaaaggcgaattgttc
gacacgatggtagctcactatctcattaatcctgatatgcgtcacaatatggacgtactt
tctgaaacatatttagattatacacccatttctattgaaaaattaataggaaaaaaaggc
aagaatcagctttcgatgcgttctgtatctcttgaagaccagaaagaatacgccgttgaa
gatgccgatgttacttggcaattgaaagaaatctttacagaagaactcaaaaaggtaaat
gcagataaaatttatcgtgagttagaagctcctttggtacaagtacttgcaaaaatggag
ttggaaggaattaatttggatacttctttcttaaaaaggctttcggaaaaattagatgaa
gatattatcgcttacgaaaaagaaatcttaacagctgcaggagaagattttaacttagct
tctcctaagcaattgggcgaaatcttattcgaaaaacttaaaattgataaaaaacctaaa
aaaaccaaaacagggcaatatgcaacatcggaagaagtactatcatactttgccgataaa
cacaaaatcgtagccgatattttggaatggaggcaacttcaaaaattaaaatcaacttac
attgatgcactccccaatgaagtaaatcctaaaacaggaagagtacacacaacctatatg
caaacggttgcagccactgggcgtttgagcagtaacaacccaaatttgcaaaatatccca
attcgtacagaaagagggcagcaaatacgtaaggcgttcattcctaaagacgaaaatcac
attttattagcagcagattactcacaaattgaactcagaatcattgcctcattaagtgaa
gaacaaaatatgattcaagcctttttgaataatgaggatattcatcgctcaacagctgct
aaagtctttaatgttcctattgaagaagttacacgcgaacaacgaagccacgccaaaaca
ataaatttcggaattatttatggtgtatcagcttttgggcttagtaaccaaaccgacctt
tcacgtacagaaagtaaagaactcatagaaacctattatgctacatatcctaatttacgt
aattatatcaataagcaaatattttttgctcaacaaaatggatatgtagaaactatctta
ggaagaagacgttatctaccagatattaattctagaaatcaagtggttaaaggtgcagct
gaacgaaatgctatcaatgctcctattcagggaagtgcagccgatattataaaaatagca
atgattcgtgttcaaaaccgattggaaaaagaaagcttcaaaagcaaaatgttactacaa
gtacacgatgaattagtattcgatgtgccaaaaatagaattggaagaagtaaaaaatgct
attaaatacgaaatggaaaacgctttcaagcttattgtacctttagttgtggatttgggc
gttggaacaaactggctcgaagcacattaa
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