Capnocytophaga cynodegmi: CGC48_06705
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Entry
CGC48_06705 CDS
T05499
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ccyn
Capnocytophaga cynodegmi
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccyn03016
]
CGC48_06705
Enzymes [BR:
ccyn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CGC48_06705
Transfer RNA biogenesis [BR:
ccyn03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CGC48_06705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ATA69309
UniProt:
A0A250E8K3
LinkDB
All DBs
Position
complement(1528087..1529532)
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AA seq
481 aa
AA seq
DB search
MEKVIDESKQGQSLVLKENTNNHKKLYIESYGCQMNFSDSEIVASILSEQGYNTTQTLEE
ADLVLVNTCSIREKAEQTIRKRLEQFNAIKRNRPAMKVGVLGCMAERLKHAFLEEEKIVD
MVVGPDAYKDLPNLLQEVEGGREAVNVILSKDETYADISPIRLNSNGVTAFVSITRGCDN
MCTFCIVPFTRGRERSRDPFSILNEIKDLEERGFKEITLLGQNVDSYLWYGGGLKKDFDK
ASEMQKATAVNFAKLLDMVAIAHPKMRIRFSTSNPQDMTLDVIDTMAKHHNICKYIHLPV
QSGSNRILKAMNRLHTREEYFTLIDNIRKRIPECAISQDMIAGFPTETEADHQDTLSLME
YVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKHRLSEIIDLQQKHSLLRTQEKVGQIC
EVLIEGNSKKSDTQWMGRNTQNTVVVFPKEHYKVGDFVNVKIESCTSTTLIGKAIGYSEM
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttattgacgaatcaaagcaaggacaaagtcttgttttgaaagaaaatacg
aacaatcacaaaaaattatatatagagagttacggctgtcagatgaatttttcagatagc
gaaattgtagcttccattctttccgaacagggatataataccacacaaacgctcgaagaa
gccgatttagttttagtaaatacgtgttccattcgcgaaaaagccgaacaaaccattcgt
aaacgattggagcaattcaatgccatcaaaagaaatcgtcctgcgatgaaagtaggagtg
ttgggctgtatggctgaacgcctaaaacacgcttttctggaagaagaaaaaatcgtagat
atggtggtaggacctgacgcttacaaagatttacccaatcttttgcaagaagtagaaggc
ggacgcgaagccgtaaacgtaattctttccaaagatgaaacctatgctgatatttctcct
attcgcctcaacagcaatggagtaactgcctttgtttccattacacgtggttgcgacaat
atgtgtacgttttgtatcgttccctttacacgcggacgtgaacgtagccgtgaccctttt
tctatcttaaatgaaatcaaggatttagaagaaagaggctttaaggaaattacgcttttg
ggtcagaatgttgacagctatctttggtatggtggcggactaaaaaaagattttgataaa
gccagtgaaatgcagaaagccactgccgtaaatttcgcaaaactacttgatatggtggca
attgctcacccaaagatgcgtatccgtttttccacatctaatccacaagatatgactctt
gatgtgattgacacaatggcaaaacatcacaatatttgcaaatatattcacttgcctgta
caaagcggaagcaatcgtatcttaaaggcaatgaaccgattacatacaagagaagagtat
ttcacattgattgataatatccgaaaacgcattcctgaatgtgccatttcacaagatatg
attgctggatttcctacagaaactgaagccgaccaccaagatacactttcactaatggaa
tacgtaaaatacgacttcggatttatgtttgcctattcggaacgaccaggaacacttgct
gcacgtaaaatagaagatgatgttcctgaagaagttaagaaacatcgtctttctgaaatt
attgatttacaacaaaaacacagcttacttcgcacacaagaaaaagttggacagatttgc
gaggtgcttatcgaagggaattccaaaaaatcagacacccaatggatgggacgaaacacg
caaaacaccgtagtagttttcccgaaagaacattacaaagtaggtgattttgtgaacgtt
aaaatagaaagttgtacctcaaccacccttatcggaaaagctatcgggtatagcgagatg
aactaa
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