Capnocytophaga cynodegmi: CGC48_10355
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Entry
CGC48_10355 CDS
T05499
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccyn
Capnocytophaga cynodegmi
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccyn03016
]
CGC48_10355
Enzymes [BR:
ccyn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CGC48_10355
Transfer RNA biogenesis [BR:
ccyn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CGC48_10355
Prokaryotic type
CGC48_10355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ACT_phage
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ATA68984
UniProt:
A0A250E7P3
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All DBs
Position
2342912..2343661
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AA seq
249 aa
AA seq
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MRYFIEFSYNGKNYHGWQNQPHSVSVQEVMEKCLTTLLRTKIEIVGAGRTDSGVHALQMF
AHFDTEKTIDNQLVYKLNSFLPKDIAVHQIHKVRDDAHARFDAIKRTYEYHISTYKDVFR
YESSMYINLPLDVQKMQEAANILFKYTDFQSFSKSNTDVRTYNCKIYQALWRQEGELLIF
TISADRFLRNMVRAIVGTLIDVGLNKISVVDFQNIIESKNRSKAGASVPACGLFLKKVEY
SEDIFVKND
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcgatattttatagaattttcatacaacggaaaaaattatcacggttggcaaaatcag
cctcattctgttagtgttcaggaagttatggagaaatgcctcactacacttttacgaaca
aaaatagaaattgtaggagcaggaagaactgatagtggtgtacacgctttgcaaatgttt
gctcattttgatactgaaaaaactattgataatcagttagtttataagttgaattctttt
ctacctaaagatattgctgtccaccaaattcataaggtgagagatgacgctcacgctcga
tttgatgcaataaaaaggacttatgaatatcatatttcgacttataaagatgtatttcgt
tatgagtcaagtatgtatataaatcttccgttagatgtgcaaaaaatgcaggaagctgcg
aatattctttttaaatatactgattttcaaagtttttcaaaatcaaatacagatgtaaga
acttataattgtaagatttatcaggctctttggaggcaagaaggggaattgttaatcttc
acaatttcagcagaccgattcttacgcaatatggtacgtgccattgtgggaacattaatt
gatgtgggtttgaataaaatatcagttgttgattttcagaatattatagaaagtaaaaat
cgttctaaggcaggagcttctgtaccagcttgtggacttttcttaaaaaaagtagaatat
tcggaagatattttcgtgaaaaatgattag
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