Capnocytophaga cynodegmi: CGC48_11200
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Entry
CGC48_11200 CDS
T05499
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccyn
Capnocytophaga cynodegmi
Pathway
ccyn03030
DNA replication
ccyn03430
Mismatch repair
ccyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC48_11200
03430 Mismatch repair
CGC48_11200
03440 Homologous recombination
CGC48_11200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccyn03032
]
CGC48_11200
03400 DNA repair and recombination proteins [BR:
ccyn03400
]
CGC48_11200
Enzymes [BR:
ccyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC48_11200
DNA replication proteins [BR:
ccyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC48_11200
DNA repair and recombination proteins [BR:
ccyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC48_11200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNApol_Exo
Rv2179c-like
CAF1
HTH_Mga
TFIIE_beta
MtaB
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ATA69134
UniProt:
A0A250E839
LinkDB
All DBs
Position
2533126..2533740
Genome browser
AA seq
204 aa
AA seq
DB search
MSFFNIFRNKSKKNEVPLENVRFVVFDTETTGFKFSTDRILSIGAVIILNNRIDLKNSIE
FFLEQEKSNPESIPIHGIIKNHKYQKLAEREALVQFLEYIEDAILVGHHVGYDVKMINAA
LQRNELSPLKNKYLDTNYLFKKTKVINYLLKNDKNYSLDEICQELNITTHDRHNAAGDAF
LTAIAFLKIINKLKITTLGALLKL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttttaatatatttcggaataaatcaaaaaaaaatgaagttcctctggaaaac
gttcgttttgtagtttttgatacagaaaccactggatttaagttctctacagataggata
ttatccataggagctgtaatcattttaaataatcgtattgatttaaagaatagtattgaa
ttttttttggagcaggaaaaatcaaatcctgaaagtattcctattcacggaattataaaa
aatcataagtatcaaaaattggctgaaagagaggctcttgtccaatttttggaatatatt
gaagatgctattctggtagggcatcacgtaggatacgatgtgaagatgataaatgctgca
ttacaacgaaatgagctttctcccctaaaaaacaagtatttagatactaattatctgttt
aagaaaaccaaagtcattaattatcttttgaaaaatgataagaattatagtttagatgaa
atttgtcaagagttaaacataacaactcacgacagacataatgcagcaggtgatgctttt
ttaacagcaattgcttttcttaaaattataaataaattgaaaattactacattaggagct
ttgctgaaattgtaa
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