Corynebacterium cystitidis: SAMEA4530656_0769
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Entry
SAMEA4530656_0769 CDS
T07131
Symbol
polC_1
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03030
DNA replication
ccys03430
Mismatch repair
ccys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4530656_0769 (polC_1)
03430 Mismatch repair
SAMEA4530656_0769 (polC_1)
03440 Homologous recombination
SAMEA4530656_0769 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccys03032
]
SAMEA4530656_0769 (polC_1)
03400 DNA repair and recombination proteins [BR:
ccys03400
]
SAMEA4530656_0769 (polC_1)
Enzymes [BR:
ccys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4530656_0769 (polC_1)
DNA replication proteins [BR:
ccys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4530656_0769 (polC_1)
DNA repair and recombination proteins [BR:
ccys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4530656_0769 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF4429
PTCB-BRCT
DUF1265
Motif
Other DBs
NCBI-ProteinID:
SNV71102
LinkDB
All DBs
Position
1:complement(787062..788441)
Genome browser
AA seq
459 aa
AA seq
DB search
MIAAHGATVTVTNTTIRLTPTELAASLSGSSGDVTIAVDELDDVTVTPGDAWDNATVTLT
TATTASAPITISFAPGSHAAIDQLIALIDAARRGEAPRDAVLDAGVPGLDFVAFDVETAN
GRWGSICQIGAAKVIDGAITETASWLCTPAPGLEEFDPFNVEIHGITAETVAGQPTFQER
LAEFRAFVADLPLVAHNAQFDTTALREACQASDVEAPHAMFACTLAQSRASSLSVRDHKL
PTIAAHLGVDLSSHHDAEADAVACAGIMVELARRAHHTGSLMEFVHSAGFTLGVLEPKRV
IPTLRDRSGASRALQAKRVKNDESPAPHVSGAGTDQSTQPQQTTRRGPAPWQSVATPDTI
PEPNEEADPSHILFGENVTLTGEFEPFDKGTLWAGIAQCGAQVGKNVTKKTTILVTGQWA
TMTSKEKRARELIDQGQELQIWSADKLLEALGLDEQPPF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcagctcacggcgccacagtcactgtcactaacaccaccatccgcttgacaccg
acagagctagcagcatcattaagcggctcatcaggagatgtcactattgccgtcgatgag
cttgacgatgtcactgtcacccctggcgacgcgtgggataacgcgactgtgacgctgact
actgcgaccacagccagcgcaccgattacgatcagcttcgccccgggctcccacgccgct
atcgatcaactcatcgcgcttatcgacgccgcccgacgcggcgaagcacccagggacgcc
gtactcgatgcaggtgtgccagggcttgattttgttgccttcgatgtggaaacggcaaac
ggccgatggggctcgatctgccaaattggggctgccaaagtcatcgacggtgccatcacc
gaaaccgcctcgtggttgtgcacccctgcccctgggctagaagagtttgatcccttcaac
gttgagatccacggcatcaccgctgagacagtagccggccagccaactttccaagaacgt
ctggccgagtttcgcgcatttgtggctgatctacctcttgttgcccacaacgcgcagttc
gataccactgcgctgcgtgaagcatgccaggccagcgatgtagaagcgccccacgccatg
ttcgcgtgtaccctggctcagtcacgcgcgtcgtcgttaagcgtgcgggaccacaaactg
cccacgattgccgcacacctcggagtcgacctgtcttcgcatcatgatgctgaggccgac
gcggtcgcctgcgcaggaatcatggtggagctcgcacgacgcgcccaccacacgggttcc
ctcatggagttcgtgcactcggccgggtttaccttgggagtgttagaaccaaagcgggta
attccaacgctgcgcgaccgctcgggcgcgtcccgcgccctgcaggcgaaacgcgtaaaa
aacgatgagtcacccgccccacatgtctccggagcaggcaccgaccagtccacgcagccg
cagcagaccacccgccgtggccccgccccatggcaatcagtggccaccccagacaccatt
ccggaaccgaatgaagaagcagaccccagccacatcctcttcggcgagaacgtcaccctc
accggcgaatttgaaccttttgacaaaggcacgctgtgggccggaattgcacaatgcggc
gcccaggtaggaaaaaacgtgaccaaaaagaccacaattttagtcacgggtcaatgggcc
acgatgacatcgaaggagaaacgcgcccgggagctcatcgatcaaggccaagagttgcag
atctggtccgcggacaaactattagaagccttggggttagacgaacaacccccgttttaa
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