KEGG   Corynebacterium cystitidis: SAMEA4530656_0877
Entry
SAMEA4530656_0877 CDS       T07131                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ccys  Corynebacterium cystitidis
Brite
KEGG Orthology (KO) [BR:ccys00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccys03016]
    SAMEA4530656_0877 (truB)
Enzymes [BR:ccys01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     SAMEA4530656_0877 (truB)
Transfer RNA biogenesis [BR:ccys03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SAMEA4530656_0877 (truB)
 Prokaryotic type
    SAMEA4530656_0877 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 DKCLD PseudoU_synth_2
Other DBs
NCBI-ProteinID: SNV72473
LinkDB
Position
1:complement(903426..904331)
AA seq 301 aa
MNQHLHDPLSDSGIVVVDKPQGMTSHDVVARLRRFFGTRKVGHSGTLDPMATGVLIAGLG
RGTKLLAHFVAHDKVYAATVRLGQATSTEDADGDITSTADASDVTVEQITQAIGGLTGEI
MQIPSKVSAIKIDGKRAHELVREGKQVEIPARPVTVFSFDILEIRPHDQLVDIDVRVHCS
SGTYIRALARDLGEVLGTGAHLIALRREAVGQFGLDDARTLVQLEQSPSFSLSLDEAMKR
VWPAMEVSEREFADLAMGKWLQPRGLDGVHAAIGPDGRVVALVQEKGKRLSTVFVARPST
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaccaacacctgcatgatcccctgtccgattccggcattgtggtcgtcgataagccc
cagggtatgacaagccatgacgtggtggcacgtctgcggcgtttcttcggcacacgcaaa
gtgggtcactcgggcacacttgatccgatggccaccggtgtcctgatcgccggcctgggc
aggggcacgaagttgctggcgcatttcgtggcccatgacaaggtttatgccgccactgtc
cgcttggggcaggccacgtccaccgaagatgctgacggagacatcacctcgacggcagat
gcctctgacgtcaccgttgaacagatcacccaggctattgggggcctgactggtgagatc
atgcaaatcccatcgaaagtctccgcaataaaaatcgatggcaaacgcgcacatgaattg
gtgcgggagggcaagcaggtggagatccccgcacgccccgtcaccgtgtttagcttcgat
attttagagattcgaccccatgaccaactggtagatattgacgtgcgcgtgcattgctcc
tctgggacgtatatccgggctttggcgcgcgatctcggcgaggtcttggggacaggggca
catctgatcgctttaagacgagaggcagtaggccagttcggactcgatgatgcacgaacg
cttgtgcaattagaacagtcaccctcgttctccttgtctctcgatgaagcgatgaagcgt
gtctggcctgctatggaagtatctgagcgagaattcgcagatttggccatgggcaaatgg
ttgcaacctcgcgggctcgacggggtacatgctgccatcggccctgatggacgagtcgtt
gcgcttgttcaggagaaaggaaagcgcttatcgacggtgtttgtggcccgaccatcgact
ctgtag

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