Corynebacterium cystitidis: SAMEA4530656_0881
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Entry
SAMEA4530656_0881 CDS
T07131
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4530656_0881 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccys03019
]
SAMEA4530656_0881 (pnp)
03016 Transfer RNA biogenesis [BR:
ccys03016
]
SAMEA4530656_0881 (pnp)
Enzymes [BR:
ccys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SAMEA4530656_0881 (pnp)
Messenger RNA biogenesis [BR:
ccys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAMEA4530656_0881 (pnp)
Transfer RNA biogenesis [BR:
ccys03016
]
Prokaryotic type
tRNA degradation factors
SAMEA4530656_0881 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
KH_1
PNPase
S1
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
OB_cyt-4
Motif
Other DBs
NCBI-ProteinID:
SNV72525
LinkDB
All DBs
Position
1:907022..909301
Genome browser
AA seq
759 aa
AA seq
DB search
MSNFTPDNSVEFLVDDDYGITEAVATIDNGRFGTRTIRFETGQLARQADGSVTTYLDDDT
MLLATTTASNNPREGFDFFPLTVDVEERMYAAGKLPGGFFRREGRPSTEAILACRLIDRP
LRPTFVKGLRNEVQVVITVMSQNPEDYYDVVAINGASAATQLSGLPVSGAVGGVRVALIA
DDNHPEGQWVAFPNHEQHQRALFEMVVAGRMVTRKQGRKKVDDVAIMMVEAGAGVNVVEQ
VKNGAIAPTESVVAEGIEAAKPYIQTLCEAQAGLAQRTAKETQEFPLFPAYTDEIYKAVD
KKARKKLGGIMTIAGKQDRDDASNEYMEQIEDSLLDKFEDELGEEGASKQIRAAFNAVMK
DVVRGKILAEGYRIDGRSTTDIRDLGVEVDLIPRAHGSALFERGETQILGVTTLDMLKME
QQLDSLHPEKSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALEPVIPSREDFP
YTIRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLAAPVAGIAMGLISGEVNGKTKYVAL
TDILGAEDAFGDMDFKVAGTPDFITALQLDTKLDGIPSKVLADALEQAKEAREAILDTMA
EVIEEPDEMSPFAPKITTIKVPVAKIGEVIGPKGKTINQITEDTGANISIEDDGTVFISA
ASGEAADEAIEQVNSIANPQMPKVGERFLGTVVKTVAFGAFVSLTPGRDGLVHISKLGGS
KRIDKVEDVVNVGDKIQVEIADVDNRGKISLVPVGEDED
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaacttcacccctgataactccgttgaatttctagtcgatgatgattacggaatc
actgaagctgtagcaacgattgacaatggccgctttggtactcgtaccatccgctttgaa
actggccagctggcgcgccaagctgatgggtctgtgaccacctacctcgatgatgacacc
atgctactggctaccaccaccgcgtcgaacaatccacgtgagggcttcgattttttcccc
ctgactgttgatgtcgaagagcggatgtatgcggcaggaaaactgcccgggggcttcttc
cgtcgcgaaggtcgcccgtccacagaagctatcctcgcatgtcgtttgatagaccgtcct
ttgcgcccgacatttgtgaagggattgcgtaatgaggtccaggttgtcatcactgtgatg
tcccaaaacccggaggattactacgatgtagttgccattaacggcgcttctgccgcaacc
cagttgtcgggcctgccggtctctggcgctgttggtggtgtgcgagtggcgcttatcgct
gacgacaaccacccagaaggccagtgggtcgcgttccccaaccatgagcagcaccagcgc
gcattattcgagatggttgttgcaggccggatggtcacgcgtaagcagggccgcaagaaa
gtcgacgatgtggcgatcatgatggttgaggccggtgctggtgtcaacgtggtggagcag
gttaaaaacggtgcgatcgcgccgaccgaatctgtcgttgctgaggggatcgaggctgct
aagccatacatccaaactctgtgcgaggcgcaggctggactggcgcagcgcactgcgaag
gaaacccaggagtttccgctgttcccggcttataccgacgagatatacaaagcggtggat
aagaaagcgcgcaagaagctcggcgggatcatgactattgctggtaagcaggatcgcgat
gacgcctcgaacgaatacatggagcagattgaagactccctgttggataagttcgaggat
gagttgggtgaggagggtgcatcgaagcagattcgtgctgcgtttaacgctgtgatgaaa
gatgttgttcgcggcaagatcttggctgagggctatcgcatcgatggtcgcagcaccacc
gatattcgtgacctgggtgtcgaagtggacctcatcccgcgtgcgcacggctcagcactg
tttgagcgtggcgagacccagattttgggcgtgactaccctggacatgctgaagatggag
cagcagctggactctttgcaccctgagaaatccaagcgctacatccaccactacaacttc
cctccgtactccaccggtgagacggggcgggttggttcaccgaagcgccgtgagattggc
catggtgcgttggccgaacgcgctttggagcctgtcatcccctcgcgtgaggatttcccg
tataccatccgccaggtatctgaggcactcggctccaatggctcgacgtcgatgggctct
gtgtgtgcgtcgacgttgtcgctttacaatgcaggtgttccgctagccgcccctgtagcg
ggtatcgccatgggtctgatttccggtgaggttaatggcaagaccaagtacgtagccctg
accgatatcctgggcgcggaagacgcgttcggcgatatggatttcaaggttgccggtacc
cctgatttcatcaccgcgctgcagctagacaccaagctggacggcattccttccaaggtt
ttggctgatgctctagagcaggcgaaggaggcccgtgaagcgatcttggatacgatggct
gaggttatcgaagagcctgacgagatgagcccgtttgctccgaagatcaccaccattaag
gtgccagtagccaagattggtgaggtcattggcccgaagggtaagacgatcaaccagatc
accgaggatactggtgcaaacatctccatcgaggacgatggtaccgtgttcatttctgca
gcgtcaggtgaggctgctgatgaggcgattgagcaggttaactcgattgctaacccacag
atgcctaaggtgggcgagcgcttcctgggcaccgtagtgaagaccgtggcgttcggtgcg
ttcgtttccctgactccaggtagggatggcctcgtgcacatctccaaactgggcggaagc
aagcgcatcgataaggtcgaagacgttgtaaacgtaggcgacaagatccaggtcgagatc
gctgatgtagataaccgtggcaagatctctttagtgccagtcggcgaggatgaagactaa
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