KEGG   Corynebacterium cystitidis: SAMEA4530656_0886
Entry
SAMEA4530656_0886 CDS       T07131                                 
Name
(GenBank) Ribonuclease j Rv2752c
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ccys  Corynebacterium cystitidis
Pathway
ccys03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccys00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAMEA4530656_0886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccys03019]
    SAMEA4530656_0886
Messenger RNA biogenesis [BR:ccys03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SAMEA4530656_0886
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: SNV72588
LinkDB
Position
1:912809..914782
AA seq 657 aa
MNEPRNRSRKVTRKAGPPEAGDQVPVFQAADGTSKGDAPKGNAQQKKSDGNNNRGRRRGR
GRGGQNRRNPMKSMQGTDMTKRLPAPPKAPQNGLRIYALGGISEIGRNMTVFEYNGRLLI
VDCGVLFPSSGEPGVDLILPDFGPIEKKLDKVEALVVTHGHEDHIGAIPWLLKLRPDLPI
YSAKFTNALIAAKTKEHRQRPKLHEVNKDSEITCGPFNVRFWTVGHSIPDALGLSIRTGA
GQVIMTGDIKLDQTPYDGKPTDLPALSRFGDEGVDLMMCDSTNAATPGFSESEAGIEDNF
IRIVREAKQRVILASFASNVSRVQMAVNAAVAAGRKVAFNGRSMLRNMEIAEKMGLLKAP
KGTIITIDEASKMAPHRVLLITTGTQGEPMAALSRMSRREHRQITVREGDLIILSSSMIP
GNEEAIFSVINNLAQIGATVITNKDAHIHATGHGYSGELLFLYNAARPKNAMPVHGEWRH
MRANNELAISTGVKRENTVLAQNGVVVDLVNGHAKVVGQYQVGHLYVDGETMGEVEADVL
ADRTNLAAGGVVSITAVIDSRTGRLMERPAVSTTGFSEDDRGVVPEVVDLVEETMNDLAA
EGENDPYRMVQQVRRKVSRAIEQKYRREPVILPTVVPMTEDDTPVDDDDIRAARESL
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgaatgaaccccgtaatcggtcccgaaaggtcacccgcaaggctggcccgccggaggcc
ggagaccaggtgcctgtttttcaggcagccgatggtacaagcaagggtgatgcacccaag
ggtaatgcgcaacagaagaaatctgacggcaataacaaccgtggccgtcgtcggggtcgt
ggccggggtggacagaaccgccgtaacccgatgaagtccatgcagggtaccgacatgacc
aaacggttgccggcacctcccaaggccccacaaaacgggcttcgcatttacgcgctgggc
ggtatttctgaaattggtcgcaatatgacggtgttcgaatacaacggccgtctcctgatt
gtcgactgtggtgtgctcttcccgtcctcgggtgagcctggtgtggatctcatcctgccg
gatttcgggccgattgaaaagaagctggataaggtagaggcgctcgtcgtcacgcacggg
cacgaggatcacattggtgcgattccatggctgcttaaactgcgccctgatttgccaatt
tactctgcgaaattcaccaacgcgcttatcgctgctaagactaaagaacaccgtcagcgg
cccaagctgcacgaggtaaacaaggattcagagatcacctgtggcccgttcaacgtccgg
ttctggacggtagggcactccatccctgatgccttggggttgtcgatccggaccggcgcc
ggccaagtcattatgaccggagacatcaagctggatcagactccatacgatggaaaaccc
accgaccttcctgctctgtcccgcttcggcgacgagggtgtggatctgatgatgtgcgat
tcgacgaatgccgcgactccaggtttctcagagtccgaggcgggaatcgaagataacttc
atccgcatcgtccgtgaggcgaaacagcgcgtcattttggcgtctttcgcgtcgaacgtt
tcgcgcgtccagatggctgtaaacgcagctgttgcggcaggtcgcaaagtggcgtttaac
gggcgttcgatgctgcgcaacatggagatcgctgaaaaaatgggccttcttaaggcgccg
aagggtactatcatcaccatcgatgaagcttcgaagatggccccacaccgcgtgctccta
atcaccactggtactcagggtgagccgatggctgcactgtctcggatgtcgcgccgtgaa
caccgccagattactgtccgcgagggtgacttgattatcctctcatcgtcgatgattccc
ggaaacgaagaagcaatcttctcagtgatcaataaccttgcgcagatcggtgccacggtg
atcaccaacaaggacgctcatattcacgccaccggccatggttactccggtgagctgttg
ttcctttacaatgcggctcgtccgaagaacgcgatgcctgtccacggtgagtggcggcat
atgagagccaacaatgaactcgcgatttcgactggtgtcaagcgcgaaaataccgtgctt
gctcagaacggtgtggtcgtagacctagttaacggtcatgcaaaggttgttggtcagtac
caggtcggtcacctctacgttgatggcgaaaccatgggcgaggttgaggctgatgtctta
gctgatcgtaccaatctagccgcaggtggtgttgtttccattacggcggtcattgactcg
cgcaccggacgtttgatggagcgtccagcagtgtcgacaactggtttctctgaagacgat
cgtggtgttgttccagaggtcgttgacctggtggaagagactatgaatgacctcgccgca
gaaggcgagaatgatccataccggatggtacagcaggtgcggcgtaaggtctctcgcgcc
atcgagcagaagtaccggcgagagccagtgattctgccgactgtcgttccgatgacggaa
gacgatactccggtcgatgatgacgatattcgtgcagcgagagaatctctctag

DBGET integrated database retrieval system