Corynebacterium cystitidis: SAMEA4530656_0886
Help
Entry
SAMEA4530656_0886 CDS
T07131
Name
(GenBank) Ribonuclease j Rv2752c
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4530656_0886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccys03019
]
SAMEA4530656_0886
Messenger RNA biogenesis [BR:
ccys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMEA4530656_0886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
SNV72588
LinkDB
All DBs
Position
1:912809..914782
Genome browser
AA seq
657 aa
AA seq
DB search
MNEPRNRSRKVTRKAGPPEAGDQVPVFQAADGTSKGDAPKGNAQQKKSDGNNNRGRRRGR
GRGGQNRRNPMKSMQGTDMTKRLPAPPKAPQNGLRIYALGGISEIGRNMTVFEYNGRLLI
VDCGVLFPSSGEPGVDLILPDFGPIEKKLDKVEALVVTHGHEDHIGAIPWLLKLRPDLPI
YSAKFTNALIAAKTKEHRQRPKLHEVNKDSEITCGPFNVRFWTVGHSIPDALGLSIRTGA
GQVIMTGDIKLDQTPYDGKPTDLPALSRFGDEGVDLMMCDSTNAATPGFSESEAGIEDNF
IRIVREAKQRVILASFASNVSRVQMAVNAAVAAGRKVAFNGRSMLRNMEIAEKMGLLKAP
KGTIITIDEASKMAPHRVLLITTGTQGEPMAALSRMSRREHRQITVREGDLIILSSSMIP
GNEEAIFSVINNLAQIGATVITNKDAHIHATGHGYSGELLFLYNAARPKNAMPVHGEWRH
MRANNELAISTGVKRENTVLAQNGVVVDLVNGHAKVVGQYQVGHLYVDGETMGEVEADVL
ADRTNLAAGGVVSITAVIDSRTGRLMERPAVSTTGFSEDDRGVVPEVVDLVEETMNDLAA
EGENDPYRMVQQVRRKVSRAIEQKYRREPVILPTVVPMTEDDTPVDDDDIRAARESL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaccccgtaatcggtcccgaaaggtcacccgcaaggctggcccgccggaggcc
ggagaccaggtgcctgtttttcaggcagccgatggtacaagcaagggtgatgcacccaag
ggtaatgcgcaacagaagaaatctgacggcaataacaaccgtggccgtcgtcggggtcgt
ggccggggtggacagaaccgccgtaacccgatgaagtccatgcagggtaccgacatgacc
aaacggttgccggcacctcccaaggccccacaaaacgggcttcgcatttacgcgctgggc
ggtatttctgaaattggtcgcaatatgacggtgttcgaatacaacggccgtctcctgatt
gtcgactgtggtgtgctcttcccgtcctcgggtgagcctggtgtggatctcatcctgccg
gatttcgggccgattgaaaagaagctggataaggtagaggcgctcgtcgtcacgcacggg
cacgaggatcacattggtgcgattccatggctgcttaaactgcgccctgatttgccaatt
tactctgcgaaattcaccaacgcgcttatcgctgctaagactaaagaacaccgtcagcgg
cccaagctgcacgaggtaaacaaggattcagagatcacctgtggcccgttcaacgtccgg
ttctggacggtagggcactccatccctgatgccttggggttgtcgatccggaccggcgcc
ggccaagtcattatgaccggagacatcaagctggatcagactccatacgatggaaaaccc
accgaccttcctgctctgtcccgcttcggcgacgagggtgtggatctgatgatgtgcgat
tcgacgaatgccgcgactccaggtttctcagagtccgaggcgggaatcgaagataacttc
atccgcatcgtccgtgaggcgaaacagcgcgtcattttggcgtctttcgcgtcgaacgtt
tcgcgcgtccagatggctgtaaacgcagctgttgcggcaggtcgcaaagtggcgtttaac
gggcgttcgatgctgcgcaacatggagatcgctgaaaaaatgggccttcttaaggcgccg
aagggtactatcatcaccatcgatgaagcttcgaagatggccccacaccgcgtgctccta
atcaccactggtactcagggtgagccgatggctgcactgtctcggatgtcgcgccgtgaa
caccgccagattactgtccgcgagggtgacttgattatcctctcatcgtcgatgattccc
ggaaacgaagaagcaatcttctcagtgatcaataaccttgcgcagatcggtgccacggtg
atcaccaacaaggacgctcatattcacgccaccggccatggttactccggtgagctgttg
ttcctttacaatgcggctcgtccgaagaacgcgatgcctgtccacggtgagtggcggcat
atgagagccaacaatgaactcgcgatttcgactggtgtcaagcgcgaaaataccgtgctt
gctcagaacggtgtggtcgtagacctagttaacggtcatgcaaaggttgttggtcagtac
caggtcggtcacctctacgttgatggcgaaaccatgggcgaggttgaggctgatgtctta
gctgatcgtaccaatctagccgcaggtggtgttgtttccattacggcggtcattgactcg
cgcaccggacgtttgatggagcgtccagcagtgtcgacaactggtttctctgaagacgat
cgtggtgttgttccagaggtcgttgacctggtggaagagactatgaatgacctcgccgca
gaaggcgagaatgatccataccggatggtacagcaggtgcggcgtaaggtctctcgcgcc
atcgagcagaagtaccggcgagagccagtgattctgccgactgtcgttccgatgacggaa
gacgatactccggtcgatgatgacgatattcgtgcagcgagagaatctctctag
DBGET
integrated database retrieval system