Corynebacterium cystitidis: SAMEA4530656_0948
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Entry
SAMEA4530656_0948 CDS
T07131
Symbol
rnd
Name
(GenBank) ribonuclease D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ccys
Corynebacterium cystitidis
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccys03016
]
SAMEA4530656_0948 (rnd)
Enzymes [BR:
ccys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SAMEA4530656_0948 (rnd)
Transfer RNA biogenesis [BR:
ccys03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SAMEA4530656_0948 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
SNV73358
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All DBs
Position
1:complement(977542..978714)
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AA seq
390 aa
AA seq
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MAAQYELVDTAEGFSRAASVLARGRGPFAIDTERASSFRYDDRAFLVQIYRRDAGTFLFA
PEGLRDEFSAAVGPVVTGQSWILHAASEDLPSLGWLKLLPGELFDTELAGRLAGFSKPNL
AAMVQEFCGVELAKGHGREDWSRTPLPEDWLEYAALDVAYLNLLAEAQAELLDAQGKLEW
LEAECEHLVSTHADDSIPTPRSWRDTKGIGKLRTARSLHIARTIWEHRERQARETDTAPG
ALLPNRALVELAQTVPSTRRDAVRTRGVRRVFDPWPALVDAYHASPASYPDPRCYTGETP
GKTLWQREAPTSYAHLQAIRQNIAERADEITIHASDMLAPALLRTVVWEATTESGVWSTH
RIAVALQRRGARMWQIALTAPLIAAQLNSD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaatacgaactcgttgatacggccgaggggttttcccgagcggcatccgtt
ttagcgcggggccgtggcccctttgcaatagacaccgaacgcgcgtcatcgtttcgctat
gatgaccgcgcttttcttgtccagatttaccggcgcgacgcaggcactttcctattcgcc
ccagagggactgcgggacgagttttccgccgcggtaggccccgtagtcaccggacagtca
tggattctgcatgcggccagtgaggaccttcctagccttgggtggttgaaattgttgcca
ggtgagcttttcgatacagaactagcgggccgattagctggctttagcaagccaaatctt
gccgccatggtgcaggagttttgcggtgtggagctggccaagggccacggccgcgaagac
tggtcacgtacaccgctgcctgaggactggttagagtacgccgccctcgatgtggcctat
ctcaatctcctagctgaagcacaagccgaattactggacgcacaaggaaagctcgagtgg
ctcgaagctgaatgcgaacacctcgtgtccacgcatgccgacgatagcatcccgacgcca
cggtcatggcgggataccaaaggtatcggcaagttgcgcactgcgcgaagcctgcatatc
gctcgaactatctgggaacaccgggaacgacaagcccgagaaacggacaccgctcccggg
gctctgctgcccaacagggcgcttgttgagctcgcgcagacggtgccgtcgactcgccgt
gacgctgtccgaacccgcggggtccgtcgcgtttttgatccgtggccggccctcgtggat
gcctaccatgcgtctcctgcttcgtatccggatccacgctgctatacaggtgagaccccc
ggaaagacgttgtggcagcgtgaggcgcccacgtcgtacgcgcatttacaagccatccgt
cagaacatcgcagagcgtgctgacgagatcaccatccacgcgtccgacatgctggctcca
gcacttcttcgcactgtggtctgggaagcaacaactgagtcgggtgtgtggagtacccac
cgcatcgctgtagctctccaaagacgtggtgcacgaatgtggcagattgcgttgactgca
ccgctgatcgccgcgcagctcaatagtgactag
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