Corynebacterium cystitidis: SAMEA4530656_1220
Help
Entry
SAMEA4530656_1220 CDS
T07131
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03030
DNA replication
ccys03410
Base excision repair
ccys03420
Nucleotide excision repair
ccys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4530656_1220 (polA)
03410 Base excision repair
SAMEA4530656_1220 (polA)
03420 Nucleotide excision repair
SAMEA4530656_1220 (polA)
03440 Homologous recombination
SAMEA4530656_1220 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccys03032
]
SAMEA4530656_1220 (polA)
03400 DNA repair and recombination proteins [BR:
ccys03400
]
SAMEA4530656_1220 (polA)
Enzymes [BR:
ccys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4530656_1220 (polA)
DNA replication proteins [BR:
ccys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SAMEA4530656_1220 (polA)
DNA repair and recombination proteins [BR:
ccys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SAMEA4530656_1220 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4530656_1220 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Drf_FH3
DNA_pol_lambd_f
HHH_5
4HB_MCP_1
Motif
Other DBs
NCBI-ProteinID:
SNV76625
LinkDB
All DBs
Position
1:complement(1268666..1271299)
Genome browser
AA seq
877 aa
AA seq
DB search
MAFRAFYALPAENFSTSGGQHTNAVYGFLSMLANILADEKPTYAAVAFDVGRKTFRTEMF
PEYKAQREASPEEFKGQVPLIDDILNDLGITTLSVENYEADDIVATLVTQAKAAGDFEIL
IVTGDRDYLQLVDDTTTVLYPTRGVSTMTRFTPEAVKEKYDLTPAQYPDFAALRGDPSDN
LPNIPGVGEKTATKWINQYGDLETLLDHADEIKGKVGDNLRERLDQVRMNRKLTQMVSDM
ELGVAPDDLELKPVDVGTVATAFDELEFGVNLRERVLAAVPTSGSSTDAHSADSAAGGSV
QLPDVVVSDEPLDQWLKAREGQGMAVFFVGKGEPNRGDASAVGIVDKKRDGVARELAELS
PAEDAAFKAWLESNSPKYLHEAKAAFHMLAGRGIELNGIAHDTAIAAYLLRPGQRTYELR
DVYQRHLQRQLAEAGEQLSLLGDTSLTDSAVAILELAEELTSQLKEINSFDLYQDLELPL
VSILARMENTGIAMDVDVLEDQLKTFTDQVAQVEEEARRLVDEPDLNLSSPKQLSVVLFE
KLDLPKTKKTKTGYSTAAKEIEALAKKNPHPFLDHLLAHREYQKMKSTLEGLIKTVQDDG
RIHTTFNQTVTSTGRLSSTDPNLQNIPVRTEAGRRIRSAFVVGEGFETLLTADYSQIEMR
VMAHLSQDPGLIEAYKEGEDLHNYVGSKVFDVPIDEVTSELRRRVKAMSYGLVYGLSAFG
LSGQLDISPGEAKQIMESYFDRFGGVKKYLDEVVEQARRDGYTSTVFGRRRYLPELTSDN
RVARENAERAALNAPIQGTAADIIKVAMIRVDAALRQRALASRVLLQVHDELVVEIAPGE
LEEVQQLVEAEMDNAITLRVPLEVSAGAGKNWDEAAH
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggccttccgcgctttctacgcgttgccagccgaaaacttttctactagcggtggacag
cacaccaacgcggtgtatggttttctttcaatgctggcgaatattctcgccgacgagaaa
ccgacttacgcggctgttgcgttcgatgtgggccgcaaaacgtttcgcaccgagatgttc
ccggagtacaaggcgcaacgggaggccagccccgaggaatttaagggccaggtcccgctt
atcgacgacatcctgaatgatctggggatcaccacgctatctgtggaaaattatgaggcc
gacgatattgtggccacgcttgttacccaggcgaaggcggccggtgattttgagattttg
attgttaccggtgatcgtgattacttgcagcttgtcgacgacacaaccacggttctctat
cccacccgcggtgtgtccacgatgacgcggttcaccccggaggctgtcaaggagaagtat
gatctgacacctgcccagtacccggattttgcagctctgcgcggcgacccgtctgataac
ttgcccaatatccctggtgtgggtgagaagactgctacgaagtggattaatcagtacggc
gacttggagacgttgcttgaccacgccgatgagatcaagggtaaagttggcgacaacctc
cgggagcgcctggaccaggtgcgcatgaaccgcaagctcacccagatggtctccgatatg
gaacttggtgttgcaccggatgatctggagcttaagcccgtggacgtgggcacggtggct
acggcgttcgacgagctggagtttggtgtgaacctgcgtgagcgcgtgctagcagcagta
cccactagcggttcttcgactgatgcacatagtgctgattccgcggccggtggcagcgta
cagctgcccgacgtggtggtatctgatgagccattggaccagtggctaaaagcacgcgag
ggtcaagggatggcagtgtttttcgtcggcaagggcgagccgaaccgcggggatgcaagc
gcggtagggatcgtcgataagaaacgcgacggtgtggcgcgcgagcttgctgagctgagt
cctgcagaagacgcggctttcaaggcgtggttggaatcgaattcgccgaagtacttgcat
gaggcgaaagcggcgtttcatatgttggctggtcgcgggattgagctgaacgggattgcg
cacgatacggcgatcgcggcgtacctgttgcgcccgggccagcgcacctacgagctgcgc
gatgtgtatcagcgccatctgcaacgccagttggcggaggccggtgagcagttgagtttg
ctgggggatacgtcgctaacagattccgctgtcgcgattttggagttagccgaggaactg
accagccagctcaaggagatcaatagcttcgacttgtaccaggacctagaactgcctttg
gtgtctatcttggcgcgcatggaaaacaccggcatagcgatggatgtggacgtgctggaa
gaccagctgaaaacgttcacggaccaggtcgcacaggtggaggaggaagcacgcaggctg
gtcgacgagcccgatctgaatttgtccagcccgaagcagctgtccgtggtgctttttgaa
aagctggatctacccaaaaccaagaagacgaagaccggttattcaacggcggctaaggaa
attgaggcgctggcgaagaagaacccgcacccttttttggaccacctgttggcacaccgt
gagtaccagaagatgaagtccacccttgagggcctgatcaagaccgtccaggacgacggg
cggattcacactacgtttaaccagacggtcacgtcgactggccggctcagctctaccgac
ccgaatttgcagaatatcccggtgcgtactgaggcaggtcgcagaatccgttcggcgttt
gtggtgggcgaaggctttgagacgctgctgacggccgactactcccaaattgagatgcgt
gtgatggcgcacctgtcgcaggatccgggactaatcgaggcgtacaaggagggcgaggac
ctgcataattacgttggctcaaaggtgtttgatgtgccgatcgacgaggtgacctcggaa
ttgcgccgccgtgtgaaagccatgagctacggcctggtgtacgggttgagtgcttttggg
ctatcgggccagttagacatcagccctggagaggcaaagcagattatggagagctacttc
gaccgctttggtggtgtgaagaagtatttagatgaggtggtggagcaggcgcggcgtgac
ggttacacgtctactgtgtttggtcgccgccgctatctgccggagttgaccagtgataac
cgtgtggcccgcgaaaatgctgagcgtgccgccttgaacgcaccgatccaaggtaccgcc
gccgacattattaaggttgccatgatccgcgtggatgcggcacttcgccagcgtgcgctg
gcctcgcgcgtgttgctgcaggtccatgacgaactagtggtagagatcgcccccggtgag
ctggaagaagttcagcagcttgtcgaggctgagatggacaatgcgattacgctgcgcgtg
cccctcgaggtgtcggccggggccgggaagaattgggatgaagccgcgcattaa
DBGET
integrated database retrieval system
