Corynebacterium cystitidis: SAMEA4530656_1253
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Entry
SAMEA4530656_1253 CDS
T07131
Symbol
lysX_3
Name
(GenBank) lysyl-tRNA synthetase 2
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA4530656_1253 (lysX_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccys01007
]
SAMEA4530656_1253 (lysX_3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccys03016
]
SAMEA4530656_1253 (lysX_3)
Enzymes [BR:
ccys01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SAMEA4530656_1253 (lysX_3)
Amino acid related enzymes [BR:
ccys01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SAMEA4530656_1253 (lysX_3)
Transfer RNA biogenesis [BR:
ccys03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAMEA4530656_1253 (lysX_3)
Prokaryotic type
Other AARSs
SAMEA4530656_1253 (lysX_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
LPG_synthase_C
tRNA_anti-codon
tRNA-synt_2_TM
tRNA-synt_2d
Rv3627c_N
DUF2976
Motif
Other DBs
NCBI-ProteinID:
SNV76998
LinkDB
All DBs
Position
1:complement(1302894..1306082)
Genome browser
AA seq
1062 aa
AA seq
DB search
MRSHWQSHLILGAAQLSVLWLAVGIILGEINPKLVDAIYTVFFLAGLPAFPTLVLLVITS
LLVSGMLRGLRAAFITYIALFPGMSALVSLGYGGAMLVGLYSYTPRDIVYTVISLVAAFG
WLWCAATAIKDFPARLRRSKYAALGALVAGLGLSVVITWLLLLFFTGFGPGYGVLLAFDT
ALSINATTDALTVQTVAPGWITFISHAVSALAVLNALRVLLRVPAAKPATEDEYRALRRI
IAASDAPGSLDYFAANDDRSTIFSRDGQAAVSFRLIGGVAVAAGDPIGRQASWTDAVNQW
IKIGTHNGWILSVASTSDVGARVYQQAGMSIARLGDEAVISTEKFRLKNLPEVRRDSAAA
KNAGYTVSITRQGDMSAEALAELRHVVTSWRTEKERGFTMASGRVGDPRDPRTVVVMARN
AQGEPMGVLTFVPWGSRGVSLDVMLRSPQAVSGVTELMVSTLATEGPELGIERFSLNFVT
FREALTRGAMLGASPLQKLLLKFLVLSSRWWQIYSLYQSNVKYQPEWVPRYLGVMDSFHA
ARCLISFAAGEGFLPLGGARTTTALGQPELIKQIEQEALRPALAPRQLSPLQKHRHGLVQ
QMRATGHEPYPARVPRNAELDQPSEDQLREGTVSVTGRVRYIRNHGGVIFADIVEGEHEL
QLIVERATQPAHTDFRRWVGRGDIISVTGTHGTSRTGHPSLLVQSWEMAAKCLVPVPMVA
SADPHTRAMLRHMDFALNPDARRIFIARCQAVAAVRSVLQEHGYLEAETPILQTIHGGAN
ARPFRTHINAYDQNLTLRIAPELYLKRLVVGGFEKVYEIGRNFRNEGVDATHNPEFTSLE
VYQAFGDWDTMRELTEEIVRAAALAVHGSLILDAPDGSSVDLGKPWPVVYVVEAVSEAVG
ETIDLAAPLERYQHLAQRYGLQPSSVGDLVTELYDELVEPTTVAPTFYAGFPTETSPLTM
ADPEQPLIAQRWDLVAFGMELGTAYTELADPVEQRARLEQQSLLAAGGDVEAMEVDEDFL
TALEFGFPPTGGMGMGIDRLVLLLMSTTIREVLAFPFVKPRN
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctcattggcaatcacacctcattcttggtgctgcacagttaagcgtgttgtgg
ttggctgtgggcataatcctgggcgagattaatccaaaattggtagatgcaatctacaca
gtctttttccttgccggattgcctgccttcccaacacttgtcctattggtgattacaagc
ctgcttgtctccgggatgttacgcggtttgagagctgcctttatcacctatatagctctc
ttcccgggaatgtctgcgctagtgagccttggctacggcggggcaatgttggtggggctg
tacagctacacaccgagagacattgtctatacggtcatcagccttgtcgctgcattcggc
tggttatggtgcgctgcaacagctattaaagattttccggcccggctgcggcgcagcaag
tatgcggcgcttggagcccttgttgcagggcttgggctatcagtagttattacctggttg
ttgttgctgttcttcacaggcttcgggccgggctatggggtgcttcttgcctttgatacc
gcgctgagtatcaacgccaccacagatgctttgaccgtgcaaaccgttgcacctggctgg
atcacttttatcagccatgctgtttcggcactggcagtgcttaacgcgctgcgggttttg
ctgcgggttcctgcggcaaaaccagctacggaagatgaatatcgtgctctgcgtcgaatc
atagctgcgtcggatgcgccagggtccctggactatttcgcagcgaacgatgaccgctcc
acaattttctctcgcgatggccaggcagctgtgtcttttcggctcatcggtggtgtggcc
gtagcagcgggagaccccattggtaggcaggcgtcgtggacggacgcagttaaccagtgg
attaaaattggcacacataatggctggattctttcagtggcttccacctcagatgtggga
gcacgtgtctaccaacaagcggggatgagcattgccaggttaggcgatgaagctgttatc
tctaccgagaaatttcggttgaaaaatttaccggaggtccgccgcgactcagctgcggca
aaaaatgccgggtacaccgtgtccattacccgccaaggcgacatgtccgcagaggcacta
gccgagctccgccatgtggtcaccagctggcgtacggaaaaagaacgcggttttacaatg
gcctcggggcgagtcggggatccgcgcgatccccgtaccgtggtggtgatggcccggaac
gcacagggagaacctatgggggtattaacgtttgtaccctggggcagccggggtgtttcc
ctcgatgtgatgctgcgcagcccccaagcagtcagcggcgttactgagcttatggtctca
actcttgccaccgaaggccctgagctaggaatcgagcgcttttccctcaactttgtcacc
ttccgtgaagcactgacacgcggtgccatgttaggggcaagcccactacagaaactgctg
cttaagtttcttgtgctgtcttcacggtggtggcagatttatagcctgtatcagtcgaat
gtgaagtaccagccggagtgggtgccgcgctaccttggggtgatggattctttccatgcc
gcgcgctgccttattagttttgcggctggagaaggtttcctccccctcggaggtgcccgc
acaaccacagcgcttggacaaccggagcttattaagcagattgaacaggaagcattgcgc
cccgctttggcgccacgccaactatcgccactacaaaaacaccggcatgggttagtccag
cagatgcgtgccactggccatgagccctacccggcacgggtgccgcgtaacgctgagctt
gatcaacccagcgaggatcaactccgcgagggcaccgtgtcagtcacaggtcgggttcgc
tatatccgtaaccacggtggggttattttcgctgacatcgttgaaggcgaacacgagctt
cagcttattgtggagcgtgctacacagcccgcccatactgattttcgtcgttgggtaggt
cgtggcgacattatttctgtcaccggtacccatggtacttcgcgtacggggcatccttct
ttgctggtgcagtcgtgggaaatggcggcgaaatgtcttgtcccggtgcccatggtggct
tcggcagatcctcacactcgtgcgatgctgcgtcacatggattttgcgctcaaccctgat
gcgcgccgcatatttattgcccgctgccaagcggtcgcggcggtgcgctcggtgttacag
gaacacggttacctggaggcggaaactccgatcctgcaaacgatccatggtggtgccaac
gctaggcctttccgtacccacattaatgcctatgaccaaaacctgacgttgcggattgcc
cccgagctctatctaaagcggttagtggtgggcggttttgagaaggtctacgagattggc
cgtaatttccgcaatgaaggtgtcgatgccacccacaaccctgaatttacctccctcgag
gtctatcaagcctttggcgattgggatacgatgcgtgagctcaccgaagaaattgtgcgc
gcagctgccctggccgtccacggctcgctcatccttgacgccccggatgggtcgagcgta
gacctgggaaagccgtggccggtggtgtatgttgtcgaagcagtgtccgaagccgtcgga
gaaacgatcgatctggctgcaccccttgagcgctaccagcacttagcccagcgctacggg
ctgcagccttcctcggttggggatctggtcacggagctttacgacgaattggtggagcca
accacggtggccccaacgttttatgcgggctttcccactgaaacctcaccattgacaatg
gcggatcctgagcagccgctgattgctcagcgctgggatctggttgcttttggtatggaa
ttgggaacggcctacaccgagcttgctgatcctgtggaacagcgcgcccgcctagaacaa
cagtctttgttggccgccggtggtgatgtggaggccatggaagtcgatgaggatttcttg
acggccctggaattcgggttcccgcccaccggtggaatggggatgggtattgacaggctg
gtgttgctgctgatgtcaacgacaatccgtgaggtgctggccttcccgtttgttaaacca
cgtaattaa
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integrated database retrieval system
