Corynebacterium cystitidis: SAMEA4530656_1633
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Entry
SAMEA4530656_1633 CDS
T07131
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03420
Nucleotide excision repair
ccys03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4530656_1633 (pcrA_1)
03430 Mismatch repair
SAMEA4530656_1633 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccys03400
]
SAMEA4530656_1633 (pcrA_1)
Enzymes [BR:
ccys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4530656_1633 (pcrA_1)
DNA repair and recombination proteins [BR:
ccys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4530656_1633 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
SAMEA4530656_1633 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
DEAD
Terminase_6N
CarD_TRCF_RID
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
SNV82177
LinkDB
All DBs
Position
1:complement(1685513..1687912)
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AA seq
799 aa
AA seq
DB search
MTTDLTLGLNPQQKAAVEHSGSPLLIVAGAGSGKTAVLTRRVAYLLTQRGVAPWQILAIT
FTNKAAAEMKERVSSLIGPQAERMWVATFHSVCVRILRQQAQLVPGLNTNFTIYDSDDSR
RLLTMIAKDMNLDLKKFSARTLANAISNLKNELIDPAQAQASAEATKNPFETTVANVFGE
YQRRLRTANALDFDDLIGEVVRIFKQHPQVTDYYRRKFRHVLVDEYQDTNHAQYELIHTL
VGEGADAPELAVVGDSDQSIYAFRGATLRNIEEFERDYPAATTILLEQNYRSTQNILAAA
NAVISQNEGRRPKNLWTDHGSGDKIVGYVADNEHDEARFIAHEIDNLVDQGRNYSDIAVM
YRTNNASRAVEDIFIRSGIPYKVVGGTRFYERREIRDIVAYLRVIDNPDDTVSLRRIINV
PKRAIGDKAQAMVALHADNNNISFGKALIDAADGKVDMLATRAKNAIAGFNEMMDTLRAE
LPGMTNEVTGMPDLGELVSRILDITGYKAELEASNDPQDGARLDNLNELVSVAREFSSEA
ANQMVNEVDLASADRASADLASADLTSSVGEAVGVDDGEPAPGSLQAFLERVSLVADADQ
IPDNDQGVVTLMTLHTAKGLEFPIVFVTGWEDGQFPHLRALGDPAELAEERRLAYVGITR
ARESLYLTRAMLRSSWGNPVTNPASRFLAEIPADLIDWRREEPSYGNSSGAWGGSSSRTR
QTSRFSSGPSFGRRPQKPAVTVNKDLHLEPGDKVNHAKYGLGTVTAVDGAGARETVTIDF
GSSGTVRLMMIGGVPMEKL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgactactgacctgactttgggactcaatccgcagcagaaggcggccgtcgagcactcc
ggcagccctttgttaatcgttgctggcgcgggctctggcaaaaccgccgtgcttactcgc
cgtgttgcatatttactcacgcaacgcggcgttgcgccgtggcagatcctggcgatcaca
tttaccaacaaggctgccgccgaaatgaaagagcgcgtaagcagcctgatcggccctcag
gccgaacgcatgtgggtggccacgttccactcggtgtgcgtacgaatcttgaggcagcag
gcgcagctcgtaccaggcttgaacacgaacttcactatttatgattcggatgattcgcgt
cggctgctcaccatgatcgctaaggatatgaacctggatttgaagaagttcagcgcgcgt
accttagccaatgcgatatctaacttaaaaaatgagctgatcgacccggcgcaggcgcag
gccagtgcagaggcgacgaaaaatcccttcgagactaccgtggccaatgttttcggggag
taccagcgccgcctgcgcaccgcgaatgccttggacttcgatgatctgattggcgaggtc
gtgcgcatttttaagcagcacccgcaggtcacagactattacaggcgtaagtttaggcat
gtgcttgtcgacgaataccaggatacgaaccacgcccaatatgaactcattcacactctg
gtgggggagggggcggatgcgccagagctggctgtagtcggtgactcagatcagtcgatt
tatgccttccgtggagcgacgctccgcaatattgaggagtttgagcgcgactatcctgca
gccacaactatcctgctggagcagaactaccgctcgacacaaaatattctcgctgcagcc
aatgcagtgattagccagaacgagggcaggcgcccgaagaatctgtggaccgatcatggc
tcgggcgacaagatcgtcggctacgtcgctgacaacgagcacgatgaggcccgctttatt
gcccatgagatagataacctggtggaccaaggcaggaactactcagatattgcggtgatg
taccgcaccaataatgcatcgcgagccgtcgaagatatctttatccggtccgggatccct
tacaaagtagttggtggcacccgcttctacgagcgccgtgaaattcgtgacatcgttgcc
tatctgcgagtgattgacaacccagatgacacggtgagcttgcgccgcatcatcaacgtg
ccgaaacgcgcaattggtgacaaggcccaggcgatggtggcactccacgcggataacaac
aacatcagtttcggcaaggcacttatcgacgctgccgacggcaaggttgacatgctggcc
acgagggcgaaaaatgccattgccggatttaacgagatgatggacacgttgcgcgctgag
ttgccgggcatgaccaatgaggtcaccggtatgccggatttgggtgagctggtgtccagg
atccttgacatcacagggtacaaggcagaacttgaagcatctaatgaccctcaagatgga
gcccgcctcgacaacctcaacgaactggtctccgtggcgcgcgaattttcatcagaagct
gcaaaccagatggtgaacgaagttgacctcgcaagcgccgaccgcgcaagcgccgatctc
gcaagcgccgacctcacaagttcggtcggcgaggcagtgggcgtggacgacggggagccg
gctcctggcagcctgcaagcgtttcttgagcgcgtatctctcgtcgccgacgcagaccag
atccctgacaacgatcaaggcgtggtcactctcatgacattgcacacagcaaaggggctg
gagtttcccatagtgtttgtcacaggctgggaagacggccaattcccgcacctacgtgca
ctgggtgatcctgcagagcttgctgaagaacgtcgcctagcctatgtgggaattacacgt
gcgcgagaaagcctgtaccttacgcgggcgatgctgcggtcctcctggggcaatccggtg
actaacccggccagtcgcttcctcgcagagatcccggcggatctcatcgactggcgcagg
gaagagccttcgtacgggaattcctcgggcgcctggggtggatcgtcgtcacgcacacgc
caaacctcccgatttagttccgggccgagctttggtcgtcgcccgcagaagcctgccgtg
acggtgaacaaggacctgcacctagagccgggcgataaagtcaaccacgcgaagtacggc
ctgggcactgtcaccgcagttgacggtgccggtgcgcgagaaactgtgacgattgacttt
ggctcctccggtaccgtccgcctgatgatgatcggtggggtaccgatggagaagctttag
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