Corynebacterium cystitidis: SAMEA4530656_1687
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Entry
SAMEA4530656_1687 CDS
T07131
Name
(GenBank) DNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SAMEA4530656_1687
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4530656_1687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccys03021
]
SAMEA4530656_1687
03400 DNA repair and recombination proteins [BR:
ccys03400
]
SAMEA4530656_1687
Enzymes [BR:
ccys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4530656_1687
Transcription machinery [BR:
ccys03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SAMEA4530656_1687
DNA repair and recombination proteins [BR:
ccys03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SAMEA4530656_1687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
FlgN
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SNV82750
LinkDB
All DBs
Position
1:1740320..1741975
Genome browser
AA seq
551 aa
AA seq
DB search
MALGDGPLIVQSDKTVLLEVDHPQAGLARLALAPFAELERAPEHIHTYRITPLALWNARA
AGHDAEQAVDVLERYSRFPVPQSLLVDVAETMARYGRVRLLKHPAHGLVLESDEAPIIEE
ITRHKKIKPMLGTRIDDHTIPVHPSERGRIKQELTKIGWPADDQAGYVDGESHPIALVTA
GNGQEEWELRDYQQYAAESFWEGGSGVVVLPCGAGKTIVGAASMAQAQTTTLILVTNTVA
GRQWRNELLKRTSLTPEEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYRALELFDSRDWG
LIIYDEVHLLPAPVFRMSADLQSRRRLGLTATLVREDGREDDVFSLIGPKRYDAPWKELE
AAGYIATAECVEVRTTMNDAERMVYATAETRERYRIAATSEAKLRVVDKLLARHAGQQTL
IIGAYLEQLEEIAARIDAALITGSTSNRQREQAFDAFRRGELQTLVVSKVANFSIDLPEA
AVAIQVSGTFGSRQEEAQRLGRLLRPKQDGAEAHFYTVVSRDTLDAEYALHRQRFLAEQG
YAYRLVDASDL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcactcggcgacggccccctcattgtccaatcagataagactgttctgcttgaggtg
gaccacccgcaggctgggctggcgcgtctggcgttggccccgttcgccgagctagagcgc
gccccggaacacatccacacctaccggattactccgctggccttgtggaatgcgcgcgcc
gctggccatgacgcggagcaggcggtcgacgttttggagcggtattcgcgtttcccggtc
ccgcagtcgttgcttgtcgatgtcgccgagaccatggcccgctacggccgggtccgcttg
ctcaagcacccggcgcacggtctagtgcttgagtccgatgaggcgccgatcatcgaggag
atcacccggcacaagaagattaagccgatgctgggcacgcgtatcgacgatcacaccatc
ccggtgcacccctcggaacgcggccggattaagcaggagctgactaaaattgggtggcct
gccgacgaccaagcaggctacgttgatggcgagtcccacccgattgcccttgtgactgcg
ggaaatggccaggaggagtgggagctgcgtgattatcagcagtatgccgccgagtctttc
tgggagggtgggtctggcgtggtggtcctgccgtgtggcgcgggtaaaacgattgtgggg
gcggcgtctatggcgcaggcccagaccactacgctaatcctggtcaccaatactgttgcg
ggccgccagtggcgcaacgagctgcttaagcgcactagcctcactccggaagaaatcggc
gagtattccggggagaagaaggaaatccgcccggtcactatcgccacgtatcaggtggtc
acgcgtaagacgaagggtgagtaccgcgcccttgagctgttcgattcccgcgattggggc
ttaatcatttacgacgaagtccacctcctaccggcgcctgtttttcgcatgtcggcagac
ctccagtcgcgacgccgcctggggctgacagcaactttggtgcgcgaggatggccgcgag
gacgacgtcttcagcctgatcggcccgaagcgttacgacgccccatggaaagaactcgag
gccgcaggctatatcgccaccgccgagtgcgtggaggtgcgcaccaccatgaacgatgca
gaaaggatggtgtatgccactgcggagacccgcgagcgttatcgcatcgcggcgaccagt
gaggcgaaactgcgcgtcgtcgataagctccttgcacgtcatgccgggcaacagaccctg
atcattggcgcgtacctggagcagttggaagagatcgccgcgcgtatcgacgctgccttg
attaccggctccacaagcaataggcagcgggagcaggcctttgacgcttttcgacgtggc
gagctgcaaacattagtggtgtctaaggtggcgaacttctccattgacctgccggaagct
gcggtggcgatccaggtttccggaactttcggctcgcgccaggaagaggctcagcgactg
ggccgccttctgcgcccaaagcaggacggagccgaggcgcacttctacacggtagtctca
cgcgatacgttggatgcggagtacgcgctgcatcgccagcggttcttggcggaacagggg
tatgcctaccgcttggtggatgcgtccgacctgtag
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