Corynebacterium cystitidis: SAMEA4530656_1746
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Entry
SAMEA4530656_1746 CDS
T07131
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03420
Nucleotide excision repair
ccys03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4530656_1746 (pcrA_2)
03430 Mismatch repair
SAMEA4530656_1746 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccys03400
]
SAMEA4530656_1746 (pcrA_2)
Enzymes [BR:
ccys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4530656_1746 (pcrA_2)
DNA repair and recombination proteins [BR:
ccys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4530656_1746 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
SAMEA4530656_1746 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
SNV83421
LinkDB
All DBs
Position
1:complement(1798275..1800320)
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AA seq
681 aa
AA seq
DB search
MIDLSVLDDDQRVAATAPRGPVCILAGAGTGKTRTITYRIAHLIDQGQASPNRVLAVTFT
SRAAGEMRDRLRTMGIGGVQARTFHAAALRQLRYFWPQVYGDMPWRLIDNKFPMVGRAAR
SVGLESSKDMVRDLLGEIEWAKATLLSPEGYKERVDDYHRTPPVEAAKVAEVYQRYEDSK
TSPDGMLLDFDDLLVHVAGALENAPAVAEEFRNQYRTFVVDEYQDVTPLQQRVLEAWLGQ
RDDLTVVGDANQTIYSFTGATPDYLLNFSRTYDNATVVKLQRDYRSTPEITDLANTVIGK
ATGRAAGTRLELIGMREHGPQPTFNAYDDEPTEAREVAGTILSLINSGVPAGEIAVLYRV
NAQSAEFEQALSDAGIVYQVRGGEGFFARPEIREAIHALTKATRHPRLQANPIQAAREVL
APLGLTPTEPQGAQARERWQILGALVDLIEGIVNHAEATNLVGVLQSLHKRAESKQPPAV
DGVTLASLHAAKGLEWDAVFLVGLVEKTLPISHAIKAGAEQIEEERRLFYVGVTRAREHL
HLSWALARQEGGNKSRKRSRFLDGIAPEVDVEKSPERLRRAKSCRVCGFPLDTPAEKSLG
RHADCDPGFNEDIFFALKQWRLDLSRQRNQPAYMIFTDATLMSIAEAKPTNHAELLDIAG
VGPAKVENFGDDVLEVLGGFH
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacctgagtgtgcttgacgacgaccaaagggttgctgctaccgccccgcgcgga
ccggtgtgcatcctcgctggtgcgggaacgggtaagacccgtactattacctaccgcatc
gcccacctcattgaccaggggcaggcgtcgccgaaccgtgtgcttgctgtgacgttcacc
tcgcgtgccgccggtgaaatgcgcgaccgcctgcgcaccatgggcattgggggagtgcag
gcgcgtactttccacgcggcggcgttgcgccagctgcgttacttttggccgcaagtatac
ggcgatatgccgtggcggttgatcgataacaaattccccatggtggggcgggccgcgcgc
agcgtggggctggagagctccaaggatatggtgcgcgacttactcggtgagattgaatgg
gccaaggcgacactgctcagcccggaagggtacaaggagcgtgtcgacgactaccaccgc
acacctcccgtggaggcggccaaggtagcggaggtttaccagcgctatgaggattcgaag
accagcccagacgggatgctactcgactttgatgatctgctggtgcacgtcgcgggcgcg
ttggagaacgcgccggcggtggccgaggaattccgcaaccagtaccgcacgttcgtggtg
gacgagtatcaagacgtcacacctttgcagcagcgcgtgttggaggcgtggttgggtcag
cgtgatgatctgacagtggtgggcgatgccaaccagaccatttattcctttacaggggca
acaccggactacctgctgaacttttcccgcacctatgacaacgctaccgtggtgaagttg
cagcgcgactaccgctccactcctgagattacagacctggccaacaccgtgattgggaag
gccaccgggcgcgcagccggtactcggcttgagttgatcggtatgcgcgagcacggcccc
cagcccaccttcaacgcctacgacgacgagcccactgaggcccgtgaagtggcaggcacg
atcttaagcttgattaactccggtgtgccagccggggagatcgccgtgctctaccgagtc
aacgcccagtctgcggagtttgaacaagcgctgtccgatgccggcatcgtctaccaggtc
cgtggcggtgaagggttcttcgcccgcccagaaatcagggaggctatccacgcgctgacg
aaggccacacgccacccccgcctgcaagcaaaccccatccaggctgcccgtgaggtgctg
gcaccgctagggctgacaccgacggaacctcagggtgcgcaggcccgtgagcgatggcag
atcctcggggctctggttgatctgatcgagggcatcgtcaaccacgcagaggccaccaat
ttagttggcgtcctgcaatcactccacaagcgggcagaatcaaagcagccaccggccgtg
gacggggtgacactggccagcctgcacgcggcaaagggcctcgagtgggatgccgttttc
ctggtcggactggtggaaaaaaccctgccgatttcgcacgctatcaaggcgggtgcagag
cagatcgaggaggaacgccgcctgttttacgtgggggtgacacgtgcgcgcgaacacctc
cacctctcgtgggcgctggcccggcaagaaggtggaaacaagtcgcgtaagcgttcccgc
ttccttgatgggatcgcccctgaagtggacgtcgaaaagtcccctgaacggctcaggcgc
gcaaagtcctgccgcgtgtgtggatttcctctagacacgcccgcagagaaatccctgggc
aggcatgctgactgtgacccgggcttcaacgaggacatctttttcgcgctgaaacaatgg
cgccttgatctgtcacgccaacggaaccagccggcgtacatgattttcaccgacgccacc
ctgatgtctatcgccgaggccaagcccaccaaccatgccgaattgttggatattgctggc
gtgggccctgcgaaagtggagaactttggcgacgatgtccttgaggttctgggcgggttt
cactaa
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