Corynebacterium cystitidis: SAMEA4530656_1749
Help
Entry
SAMEA4530656_1749 CDS
T07131
Symbol
pcrA_3
Name
(GenBank) putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03420
Nucleotide excision repair
ccys03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4530656_1749 (pcrA_3)
03430 Mismatch repair
SAMEA4530656_1749 (pcrA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccys03400
]
SAMEA4530656_1749 (pcrA_3)
Enzymes [BR:
ccys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4530656_1749 (pcrA_3)
DNA repair and recombination proteins [BR:
ccys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4530656_1749 (pcrA_3)
MMR (mismatch excision repair)
Other MMR factors
SAMEA4530656_1749 (pcrA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
SNV83452
LinkDB
All DBs
Position
1:complement(1802192..1805512)
Genome browser
AA seq
1106 aa
AA seq
DB search
MVNTSPMSPKLLSKYLGQKFPPTDQQAAVIGAAPGPLLVVAGAGAGKTETMASRVVWLVA
NGYARPEEILGLTFTRKAAQELGRRIRDRLTTLASTPDLVRRLDPTGGLADALTVITPTV
STYDAYAADLVREYGLLVPVEPDARLITAAELNSVARDVVTNYTGELGASSTVGAVTENL
LALVTEMDNNLHTPEWVDDEATAFINEVESLPKGPRQRADLTKTMEKWLTTQQLRRDYLP
LVSALKQELAQRSVVTFNEQMSVAARLARDHAQVGRSQRRRFRVVMLDEYQDTSHAQRVL
LRSLFGEGRDVQDRADQQSIHQASTPLTVTAVGDPMQAIYGWRGATAANLAAFVEDFPQP
NGDPAPKAELTTSWRNPPEVLQLANSVSDAVLGSNPATRAVARLEPRPQPEAGDVTVGFF
TTQDEEMAFVADQLAQQFHATQAGLEETARKFSAAVLVRKNSHSALVAQQLEQRGIPYEI
VGLAGLLDVPEVADVIAIATMLVRPEDSQAALRILTGPACGLGAADLYALGQRARNLSAT
QATQRPESDDPLDRLRHQLEQVVFETQAMTSHPDQQAGLTDAVADLGEPERYSPEGLRRL
QELSSKLRHLRMYSLGKRLPDLIADIIATFNIRTEVLSRPSSTGTVHLDRLADEVASYPG
ASVDGLLDYFSLAREHEDGLTPGAVPIRTDRVQILTAHKAKGLEWDTVAVVHADQRTYAA
KAETFLTQVQRLPVEDFTAIEEASDKKEFEDAGKEFLAKIRSDSAEETARLFYVAITRAE
RRLLITGSATTPTTTKATGPYEHFEALTELLDAKQVAVWATDNQAHGESGGNSESDTPDS
SGSHAEKGQWPQMSVDKRALEAATRIDDALGNLPDVAAGELFSLWERDTTALIEEYEALQ
SPDVDVEVPGELTASDVVAIKADPEQFARRARRPVPFKPNAYAKRGTAFHEWIEDFYGAR
PLLDEDELPGNDEANVDAETLAQLKEGFEASHWAQKTPRFIEHPFEIALGDSVVRGRMDA
VFLIDDTWWVVDWKTGQRPTGRDMETAKIQLAVYREAWKRIADDHRDVSTAFFYVRSGED
FAPRDVPDREELEKLLEFSNRKQAQK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
gtggttaatacttccccgatgtcgccgaagttgctgtcaaagtacttgggccaaaaattc
ccgccgacagaccagcaggcagccgttatcggtgcggccccaggtccgctgctggtggtc
gctggagccggtgcgggtaagacggagacgatggcatctcgggtggtgtggctcgttgct
aacggatacgcccgcccagaagagatccttgggctaacctttacacgaaaggctgcacaa
gagctgggccgacgcattcgcgatcggctgaccacgttggcttctacgccagatctggtg
cgcaggctggatcccacaggcgggcttgccgacgcgttaacggtgatcacccccactgtg
tccacctacgatgcttatgcagcagacttggtgcgtgaatacgggctgctggtgccagtg
gaaccggatgcccggctgattacggcggcggaactgaattctgtcgcccgcgatgtggtg
actaattacaccggcgagctaggggcaagtagcaccgtcggcgcggtgacagaaaacctg
ctggcgttggtgactgaaatggacaataacctgcacacgcctgagtgggtggatgatgaa
gccacggcttttatcaacgaggttgaatcgcttccgaaaggccccaggcagcgcgctgat
ttaaccaagaccatggagaagtggctgaccacgcagcagctacgccgtgattatctgccc
ctggtctctgcgctgaaacaagagttggcgcagcggtcagtggtgacgttcaacgagcag
atgtccgtggcagcgcgcctcgcacgcgaccatgcccaggttgggcgatcgcagaggcga
cggttccgcgtggtcatgctggacgagtaccaagacacctcacacgcccagcgggtgttg
ctgcgcagcctgttcggtgaggggcgcgatgtccaggaccgagccgaccaacaaagtatt
caccaggcctcgacacccctgacggtgacggcggtgggcgatcccatgcaggcgatctat
ggttggcgcggtgcaaccgccgcgaacctcgccgcgtttgttgaggactttccgcagccc
aacggtgaccccgccccgaaggcggagctcaccacatcctggcgcaacccgcccgaagtc
ctccaactagccaatagcgtgtccgatgctgtgctggggtcgaaccctgcaacgcgtgct
gtcgcgcgcctggagccacgaccgcagccggaggcaggcgatgtcaccgttgggtttttc
accacgcaagacgaagagatggctttcgttgccgaccagcttgcacagcaattccacgca
actcaggctggtctagaggagacggcaaggaagttctcagccgcggtgctcgttcggaag
aactcccactctgcgcttgtggcccaacagcttgaacaacgcgggataccctatgagatc
gtggggctggcaggcttgctggatgttcccgaggttgctgacgtgatagcaatcgcaacc
atgttggtccgccccgaggattctcaggctgccctgcgcattctgacgggcccggcctgt
gggctcggggccgcggatctttacgcgctagggcaacgagcacgaaacctgtccgccaca
caagccacccagcgccccgaaagcgatgacccgctcgatcgactccggcaccaattagaa
caggtggtttttgagacgcaggcaatgacaagccacccagaccagcaggcaggcctgacc
gatgccgtagctgacctcggtgaacccgagcgctacagccccgaagggttgcgcaggctg
caggaattgtcgtcgaagttgcgccacctgcgcatgtacagcctgggtaagcgcctgcct
gatctgatcgcagatattatcgcaactttcaatattcggaccgaggtgttgtcgcgtcca
agctcaacaggcacggtacacctcgacaggcttgccgacgaagtcgcctcctaccctggc
gccagcgtggatgggttgctggactatttctccttggcccgcgaacatgaagacggctta
accccgggtgcggtacctatccgcactgatcgcgtgcagattctcaccgcgcacaaagcg
aagggattggaatgggataccgtcgctgttgtgcacgctgaccagcgtacgtacgcagcg
aaggccgaaacgtttctgactcaggttcaacgcctaccagtcgaagacttcactgctatc
gaggaagccagcgacaaaaaggaattcgaagacgccggaaaagagtttctcgcgaagatt
cgcagcgactccgcagaggagacagcacggttattctacgtagctatcacccgggcggaa
cgacgcctcctgatcaccggctcagccaccacgcctaccaccacgaaagccaccggcccg
tatgagcacttcgaggcactcaccgaattgctagatgcgaaacaggtcgctgtttgggca
acagacaaccaggctcacggcgaaagcggcggaaacagtgaaagtgacacaccagattca
tctggctcgcacgccgaaaaggggcagtggccacagatgagcgtcgataagcgtgcactt
gaggcagcaacgcgtatcgacgacgcactgggcaacctgcccgatgtcgcagccggcgag
ctgtttagcctgtgggaacgggacaccacggcgctgatcgaggaatatgaggcgctgcaa
tcgcccgatgtagacgtggaagtacccggtgaactcaccgcctcggatgtggtagcgatc
aaagcagaccctgaacaatttgcgcgccgggcccgcaggccggtgccgtttaaacccaac
gcgtacgccaagcggggcaccgcgttccacgagtggatcgaagatttctacggtgcgcga
cccctgcttgatgaggacgaactgccaggaaacgatgaagcaaacgtggatgcggagaca
ttggcacagctcaaagagggctttgaggccagccactgggcacagaaaaccccgcggttt
attgagcacccctttgaaatcgcgctgggagactcggtggtacgaggccgtatggacgcg
gtatttttgatcgacgacacctggtgggtggtggattggaaaaccgggcaacgccccacg
ggccgagatatggagacagccaagattcagcttgcggtgtaccgcgaggcgtggaagcgc
atcgccgacgatcacagagacgtctccacagcatttttctacgtgcgctcgggggaggat
ttcgcgccgcgtgatgtgccggatcgggaagaattggaaaagctactagagttctcaaac
agaaagcaggcgcaaaaatga
DBGET
integrated database retrieval system
