Corynebacterium cystitidis: SAMEA4530656_1905
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Entry
SAMEA4530656_1905 CDS
T07131
Symbol
exoA
Name
(GenBank) exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4530656_1905 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccys03400
]
SAMEA4530656_1905 (exoA)
Enzymes [BR:
ccys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SAMEA4530656_1905 (exoA)
DNA repair and recombination proteins [BR:
ccys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SAMEA4530656_1905 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
SNV85208
LinkDB
All DBs
Position
1:complement(1967899..1968795)
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AA seq
298 aa
AA seq
DB search
MSMTIASVNVNGIRAATKVRNESNPGMLAWLEETPADVVLMQEVRATEEQAEKALAPAIE
KGWHLIAAPAEAKGRAGVGILSRRPLEDVEIGFGNFLSAGRFVAGTVDGVRVASLYLPSG
SEGTEKQDEKYRFLDDFEPMLGQWATQHQSMVIGGDWNICHREQDLKNFKTNQKKSGVLP
DERAFMDSVFGCFPDEQAQDKPTAGEYFGAVEYQSTIRREANPAPQWFDVARRLHPDDAP
YTWWTYRGQAFNNNAGWRIDYQAATQAMLDRAEKTWVEKAPTVEQRWSDHAPLLVTYK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgaccatcgctagtgtgaacgttaacggcatccgcgccgccaccaaagtgcgt
aacgagtccaacccaggaatgctggcttggttagaagagaccccggcagacgtggtgctc
atgcaggaagtacgagctaccgaagaacaagccgaaaaagcactcgcgcccgctatcgaa
aaaggctggcacctgatagcagcaccagctgaagcgaaaggccgagcaggagtcggcatc
ttaagccgccggcccctcgaggacgtagagattggcttcggcaacttcttgtccgccgga
cgcttcgtagccggcaccgttgacggtgtgcgggtggccagcctctacctcccatccggc
tctgaaggcaccgaaaaacaagacgaaaaataccgcttcctcgacgactttgaacccatg
cttggccagtgggccacgcagcaccagagcatggtgatcggcggtgattggaacatctgc
caccgcgaacaagacttgaagaacttcaaaaccaaccaaaagaaatccggcgtcctaccc
gatgagcgcgcattcatggactccgtcttcggttgcttccccgatgagcaagcgcaagac
aagcccacagcgggggagtacttcggggcagtggagtaccaatcaactattcgtcgtgaa
gcaaaccctgctccacagtggttcgatgttgcacgacgcctccaccccgatgacgcccca
tacacctggtggacttaccgcgggcaggcattcaacaacaatgcaggctggcgcatcgac
taccaagcggcaacgcaagcaatgctggaccgtgccgaaaaaacgtgggtggaaaaggcc
cctacggttgagcagcgctggagcgaccacgcgccacttttggttacatacaagtaa
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