Corynebacterium cystitidis: SAMEA4530656_1950
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Entry
SAMEA4530656_1950 CDS
T07131
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4530656_1950 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccys03019
]
SAMEA4530656_1950 (groEL)
03110 Chaperones and folding catalysts [BR:
ccys03110
]
SAMEA4530656_1950 (groEL)
03029 Mitochondrial biogenesis [BR:
ccys03029
]
SAMEA4530656_1950 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccys04147
]
SAMEA4530656_1950 (groEL)
Enzymes [BR:
ccys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SAMEA4530656_1950 (groEL)
Messenger RNA biogenesis [BR:
ccys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAMEA4530656_1950 (groEL)
Chaperones and folding catalysts [BR:
ccys03110
]
Heat shock proteins
HSP60 / Chaperonin
SAMEA4530656_1950 (groEL)
Mitochondrial biogenesis [BR:
ccys03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SAMEA4530656_1950 (groEL)
Exosome [BR:
ccys04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAMEA4530656_1950 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SAMEA4530656_1950 (groEL)
Exosomal proteins of breast cancer cells
SAMEA4530656_1950 (groEL)
Exosomal proteins of colorectal cancer cells
SAMEA4530656_1950 (groEL)
Exosomal proteins of bladder cancer cells
SAMEA4530656_1950 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
SNV85626
LinkDB
All DBs
Position
1:complement(2011239..2012858)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKLLAFDQEAREGIQRGVDQLADTVKVTLGPKGRNVVLSKAFGGPTVTNDGVTIARDID
VEDPFENLGAQLVKSVAVKTNDTAGDGTTTATLLAQALIAEGLRNVAAGSNPVELNKGIL
AATEKAVEELKARATAVSSKEEIANVATVSSRDNVVGEMVSGAMDKVGKDGVLTVEESQS
IDSYVDVTEGISFEKGYLSPYFMTDAESGQAVLDDPAILLVRNKISSLPDFLPLLEKIVA
DNKPLLIIAEDVEGEPLQTLVVNSIRKALKVVAVKAPYFGERRKAFMDDLAVVTSATVVD
PEVGINLKDAGLDVLGSARRVTVTKDDTVIVDGAGSADDVEARREQIRREIETTDSTWDK
EKAEERLAKLSGGVAVIRVGAATETEVNERKLRVEDAINAARAAVQEGIIAGGGSTLVQI
STTLRDYAEEFDAEQKVGVLAVAKALTKPAFWIAENAGLDGAVVVSKTAKLPNGEGFNAA
TMEYGNLIEQGIIDPVKVTHSAVVNASSVARMVLTTEASVVEKPADPEAPAAGAHGHHH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacttttagcattcgaccaagaagcccgtgagggcattcagcgaggtgtggac
cagctcgctgatactgtgaaggtcacccttggccccaagggccgcaatgtggttctgtcc
aaggcttttggtggccccaccgtcaccaacgatggtgtgaccatcgcacgtgacatcgat
gtggaagacccattcgagaacctcggcgcccagcttgtgaagtctgttgcagtcaagact
aatgacactgcaggcgacggcaccaccaccgcaacgctgctggctcaagcactcatcgct
gaaggcctgcgcaacgtggcggccggctcgaacccagtggaactgaacaagggtatcctg
gcagccactgagaaggctgttgaagagctcaaggctcgtgcaactgctgtctcttccaag
gaggagattgccaatgttgctaccgtgtcgtcccgtgataacgttgtcggagagatggtg
tccggcgcaatggataaggtgggcaaagacggtgttcttaccgttgaggaatcccagtct
atcgactcttacgtggatgtcaccgagggtatttccttcgagaagggctacctgtctccg
tacttcatgacggatgccgaatctggccaggctgtcctggatgatccagcaatcctcttg
gtgcgcaacaagatctcctcgctgcctgatttcctcccactgctggagaaaatcgtcgct
gacaataaaccactgctgatcatcgccgaggatgtcgagggtgaaccgctgcagacactc
gtggtcaactcgatccgcaaggcgctgaaggttgttgcggtgaaggcgccatacttcggt
gagcgtcgcaaggcgttcatggatgacttggcagtggtgacctccgcgacggttgttgac
ccagaggtgggcatcaacttgaaggatgcaggactcgacgtgctgggctccgcccgccgc
gtcaccgtcaccaaggatgacacagtcatcgttgacggcgctggctctgccgacgacgtg
gaagcacgccgcgaacagatccgccgcgaaattgaaaccactgactccacctgggataag
gaaaaggctgaggagcgcttggccaagttgtccggcggtgtcgctgtgatccgcgtgggt
gccgctaccgaaaccgaggtaaacgaacgcaagctgcgcgtcgaggacgctatcaacgct
gctcgtgctgccgtccaggaaggcatcatcgccggtggcggttccacgctggtgcagatc
tccacgactttgcgagactacgctgaagagttcgacgcagaacagaaggttggtgtgcta
gcagtggccaaggccctgaccaagccagcattctggatcgctgaaaacgcaggcctggat
ggcgcagttgtggtgtccaagaccgcgaaactgcccaatggggaaggcttcaacgccgcc
accatggagtatggcaacctgatcgaacagggcatcattgaccctgtcaaggtaacccac
tccgcagtggtcaacgcgtcatcagtggcccgcatggtactgaccactgaggcttccgta
gtggaaaagccagctgacccggaggctccagccgccggtgcacacggccaccaccactag
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