Corynebacterium cystitidis: SAMEA4530656_2733
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Entry
SAMEA4530656_2733 CDS
T07131
Symbol
mutM_2
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ccys
Corynebacterium cystitidis
Pathway
ccys03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4530656_2733 (mutM_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccys03400
]
SAMEA4530656_2733 (mutM_2)
Enzymes [BR:
ccys01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SAMEA4530656_2733 (mutM_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAMEA4530656_2733 (mutM_2)
DNA repair and recombination proteins [BR:
ccys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA4530656_2733 (mutM_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
HEPN_DZIP3
Motif
Other DBs
NCBI-ProteinID:
SNV91553
LinkDB
All DBs
Position
1:complement(2814928..2815737)
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AA seq
269 aa
AA seq
DB search
MPEGHVIHRLARRLNDDFRGQPLSVTSPQGRFSREAAVLDGSQIAQAEAFGKHLFIDFDV
DAPAHIVYIHLGLIGQVRFEPIDDRWGQMRLRIEAGKQAANLRGPQFCRLITEVERDTIV
ARVGEDPIRDDANPDALWQRVHRSRRTIGAMLMDQSMFAGVGNIYRAEVLFRQKISPFML
GTQLDRAEFDAIWADLVFLMRLGVMQGEINTVRGEHMPETMGRAARDDDHGGEVYVYRRA
GEPCYVCATPVSFQVMQGRNLFWCPTCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggtcacgtcatccatcgtcttgcgcgaaggctgaacgacgatttccgcggt
cagcccctgtctgttaccagcccccagggccgtttttcgcgggaggcggcggtgctcgat
gggtcccagatcgcccaggcggaggcttttggcaagcacttgttcatcgactttgatgtt
gatgcacccgcccacatcgtgtacatccacttgggcctgattgggcaggtgcgtttcgag
cctatcgacgaccgctggggccaaatgcgactgcggatcgaggcaggcaagcaggccgct
aacctgcgtggcccccagttttgtcgcctgattactgaggtagagcgtgacactattgtg
gcgcgtgtgggtgaggacccgatccgtgatgatgcgaacccggatgcactgtggcagcgg
gtgcacaggtcccgtcgcacgatcggtgcgatgttgatggaccagtccatgtttgccggg
gtgggcaatatttaccgcgctgaggtgctcttccgccagaaaatctccccgtttatgctg
ggtacccagctggaccgcgccgagttcgacgcgatctgggctgatttggtgttcttgatg
cgcctgggcgttatgcagggtgagattaataccgtgcgtggtgagcacatgccggaaacg
atgggtagagccgcgcgtgacgacgaccacggcggcgaagtgtatgtctatcgccgtgcg
ggtgaaccgtgttatgtgtgcgccaccccagtgtcttttcaggtgatgcagggacgcaac
ctgttttggtgccccacctgccaaaaataa
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