Chthonomonas calidirosea: CCALI_00446
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Entry
CCALI_00446 CDS
T02699
Name
(GenBank) Superfamily II DNA/RNA helicases, SNF2 family
Organism
ccz
Chthonomonas calidirosea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
NOV_C
SNF2-rel_dom
ResIII
DEAD
SLFN-g3_helicase
AAA_34
Cas3-like_C_2
Flavi_DEAD
GCP_N_terminal
Helicase_C_4
DUF3878
AAA_22
AAA_19
UPF0137
AAA_10
Motif
Other DBs
NCBI-ProteinID:
CCW34280
UniProt:
S0ET83
LinkDB
All DBs
Position
503402..506848
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AA seq
1148 aa
AA seq
DB search
MDNLRLEEGQILTGSLFKEPMRVVTARATGSDVWEVGLVGTQSEQFRLVSLTQRDLENLT
IEGTKPTYRGDGHLLRLGLQAYSLGIAYEYDPYFGLSITRVDPLPHQLEAVYEYLLKLPR
VRFLLADDAGAGKTIMAGLLIRELELRGLVERILIVCPANLTFQWQRELKEKFDQTFIVL
KGSNIRYQYGINQWLEQNRVITSLDLAKREEILKGLRQVHWDLVVVDEAHRMSATDSDHK
TDRYKLGELLRDTSDHLLLLTATPHKGDPENFRLFLQLLDADVYADVRSVRAAMERGRAP
FYLRRTKEAMVYFPESRQDGTGTWEAKKIFTKRIPYTVQFEIEGQEDELYHAVTRFVKQQ
SKKAASLDRDPRARAVGFLMSLYQRRLASSTYAMRRSLENRVRRLEEGLERAQALFGQAP
PDLPDPDEQQEMEESERERFEEMLQGFTLASNAEQIQEEIQELKCLASQAKAVEDSGTEA
KLSKLKQLLDEEGFFKDPEKRLIIFTEFKDTLDYLMEQLQSWNFRVGCIHGGMPPGSRDE
PGTRLYAEQQFREGAIQVLVATEAAGEGINLQVCNTLFNYDIPWNPNRLEQRMGRIHRYG
QRKDCLIFNFVATNTIEGRVLKRLLEKLQEIRNALDDDAVFNVVGEILPAAHVERVLRDY
YAERIGPEDLADRLLQDVDERHFREICQNALEGLAVKKLNLEMLKERRAQAKERRLVPET
IARFIQEAAQIEPRFPLKPVTHLPYTFDPGSTPPGLHRYERDPDWKLPALANKYPRFSTD
RETADTKNLEWVTPGHPLFEALRRNAYTRALKEFRTGATFYSLQHNAPARIDFYRARVVD
GLGQIVHERLFAVEISTDREPRLREPQILGNFTPAEPPDPLPAIANAPEETEWLYEHVLK
SFLEETSKERRAEVDRIEEHVELSFKALIQRADMDVGQAQDAAERGEPGASGRLTMAWNR
QTELIERRNRRQDELKQQRALSIQGVERLASVLVLPHPDRAAPEVQRLLANPETEAIAME
VVMAYERAQGREVEDVHEQNLGYDIKSLDRNSGELRLIEIKGLAGATGTILLTPNERRVA
EDRRDCYWLYIVTNCATEPKLQEPIKDPARLNWHEVTKVAHYSLSVDALTQPMQVRESST
PYGEEEQD
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacaatctgcgtttggaggagggacagatcctcaccggctcgctcttcaaagagccc
atgcgggtagtgaccgcccgcgcgacaggatccgacgtctgggaggtcggactggttggc
acgcagtccgagcagttccgcttggtgtcccttactcagcgcgacctcgaaaacctcacc
attgagggcacaaagcccacgtatcgaggagatggccacctccttcgcctcggtctacaa
gcgtactccttaggaatcgcctacgagtacgatccctatttcggcctctctatcactcgg
gtagacccgttgccgcatcagctcgaggccgtctacgaatacctcctcaagctgcccaga
gttcggttcttgctcgccgacgacgccggcgccggcaagaccattatggccggtctcttg
attcgagaactcgaactgcgtggccttgtcgagcgcatcctcatcgtctgccccgccaac
ctcaccttccaatggcagcgcgagctcaaggagaagttcgaccagacgttcatcgtcctc
aagggcagcaacatccgctaccagtacgggattaaccagtggctggagcagaatcgagtc
atcacctcgctcgaccttgccaagcgagaagagatcctcaaagggttgcggcaagtccat
tgggatctggtggtggtagacgaagcccatcgcatgagcgccaccgactccgatcacaag
accgatcgttacaagctgggcgagctgttacgcgacacgtcggatcacctgcttttgctg
acggcaacgccgcacaagggcgacccggagaactttagactcttccttcagcttctcgac
gcagatgtctacgcggatgtcaggtccgtccgagccgccatggagcgtggtcgcgcaccc
ttctacctccgtcgcaccaaagaggcgatggtctactttcctgagtcccgccaagacggc
acaggcacatgggaagcaaagaagatcttcacgaagcgcatcccctacacggtgcagttc
gagatcgaagggcaggaggacgagctctaccacgccgtcacccgcttcgtgaaacagcag
agcaaaaaggcggcaagcctggacagggatccacgcgctcgggcggtgggctttttgatg
tccctctaccaacggcggctggcctcgagcacctacgcgatgcggcgctccctcgagaac
cgcgtgagacgtcttgaagagggcttggagagagcgcaggctcttttcggtcaggctccc
ccagatcttcccgacccagacgagcagcaggagatggaggagagcgagcgcgagcgcttc
gaggagatgctgcagggcttcaccctcgcgagcaatgccgagcaaatccaggaagagatc
caggagctcaagtgcctcgcaagtcaagccaaggcggtcgaggactccggcaccgaagcc
aaactctctaagctcaagcagcttctcgacgaggaaggcttctttaaggatcccgaaaag
cgtctcatcattttcacggagttcaaggacacgctcgattacctaatggaacagctgcag
tcttggaactttcgtgtcggctgcattcatgggggcatgccgccgggctcgcgagacgag
ccggggacgcgcctctatgccgagcagcagtttcgagagggcgccattcaggtgctcgtc
gccaccgaagcggccggtgagggcattaacctgcaggtctgcaatacgctcttcaactac
gacatcccatggaacccgaaccgccttgagcagcgcatgggccgcatccatcgctacggt
cagcgcaaagactgccttatctttaacttcgtggccacaaacaccatcgagggtcgcgtg
ttgaagcggcttctggagaagctccaggagatccgtaacgcgctcgacgacgacgccgtc
ttcaacgtggttggagagatcctgcctgcagcgcacgtggagcgggtgctgcgcgactac
tacgccgagcgtataggccctgaagacctcgcagatcgcctcctccaggatgtggacgaa
cgtcatttccgcgagatctgccaaaacgctctcgaagggctagccgtgaagaaactcaac
ctagagatgctgaaagagcgccgagcgcaggccaaagagcgacgcctggtgcccgagacc
atcgcgcgattcattcaggaggcggctcagatcgagccaagattccccctcaaacccgtt
acccaccttccctacacctttgacccgggcagcactccgccggggctgcaccgctatgag
cgcgatccggattggaaacttcccgccctggccaacaagtaccctcgcttctctaccgac
agggagacggccgacacgaaaaacttggagtgggtgacgcctggccatccgcttttcgag
gcgcttcggcggaacgcctatacgcgggccctcaaagagttcagaacgggagcgaccttc
tactccctgcagcataacgcgcctgcccggatcgacttttaccgagcccgtgtggtagac
gggcttgggcagattgtccacgagcgtcttttcgcggtggagatctcaaccgaccgggag
ccgcgcctccgagagccccaaatacttgggaacttcacgccggcggagccgccggacccg
ctgccagcgatcgcgaacgctcccgaagagacagaatggctttacgagcatgtgctgaag
tccttcctcgaagagaccagcaaggagcgacgcgcggaagtcgaccggattgaagagcat
gtcgaactctcgttcaaggcgcttattcaacgggcggatatggacgttggtcaggcacag
gatgctgcagaacgcggcgagccgggagcgtcaggccgccttaccatggcatggaaccgg
cagacggagctgattgagcgtcggaaccgccgtcaggatgagctaaaacagcagcgtgct
ctctccatccaaggggttgaacggctcgccagcgtactggtgctgccgcatcccgatcgc
gccgcgcccgaggtgcagcggctcctggcgaatccggagaccgaggccatcgccatggaa
gtcgtcatggcgtatgaacgcgctcaaggtcgggaggttgaagacgtccatgagcagaac
ctcggctatgacatcaaaagccttgatcggaactccggcgagttgcggctcatcgagatc
aagggattggccggcgccaccgggacgatcctgctcactcccaacgaacgccgcgtcgcc
gaagaccggcgcgactgttactggctctacattgtcacgaactgcgccacagagcccaag
cttcaggagccgatcaaagaccctgctcgcctcaactggcacgaggtcacgaaggtggcg
cactactctctttcggtggatgcgctcacccagccgatgcaggtgcgagagagttcgacg
ccctatggagaggaggaacaagactaa
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