Chthonomonas calidirosea: CCALI_00566
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Entry
CCALI_00566 CDS
T02699
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
ccz
Chthonomonas calidirosea
Pathway
ccz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CCALI_00566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccz03021
]
CCALI_00566
Transcription machinery [BR:
ccz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCALI_00566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_IclR
DprA_WH
HTH_20
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
CCW34397
UniProt:
S0EVL1
LinkDB
All DBs
Position
638880..639794
Genome browser
AA seq
304 aa
AA seq
DB search
MMNERKKESSRKSINCIDSPSKPAHESAEVPQEGVSYLRFLTRRRLLTAEEEIELANRAR
QGDQQARNLLVEANMRLVVGIAHHYHTSLISFEDIVQEGAIGLMKAVERFDPQRGCRLST
YATPWIRQAISRAIDTKAKAIRVPAHVAESLRRLEKARLQLLTELQEEPTAEQLAERLGM
PVAKVRLLLQTAQEPLSLDTLVGEDESTPLLTLLNDQDTVDPQEVVIEEERRQQIESLFS
VLTPREAEVMRLRLGFEGNCEQMLQKIGETLHLSRERVRQIEILAIKKLKSAARLRALEE
YLGT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgagcgaaaaaaagaatcgtcacgcaagtctattaactgcattgactctccg
tcgaaaccggctcatgagagcgcagaagtacctcaagagggggtttcctatttgcgcttc
ctcacacgtaggcgcctgctgacggccgaagaggagatcgagttggcaaaccgtgctcgc
caaggcgatcaacaggcacgcaacctgctcgtcgaggcaaatatgcgactggttgttggt
attgctcaccattatcatacatctctcatctcctttgaggatattgtccaagaaggtgcg
atcgggctgatgaaagcagtcgaacgcttcgacccacagcgtggctgtcgtctcagcacc
tatgccaccccatggatacgccaggccattagccgagccatagatacgaaggcaaaagcc
attcgcgtgcctgcccacgtggccgaatcgttaaggcgcctagaaaaagcccgtctgcag
cttctcaccgaactccaggaagagcctaccgccgaacaactcgctgaacgcttaggaatg
ccggtggctaaggttcgcctcctgctgcaaacggcgcaagagccactgtcgctcgatact
ctggtcggtgaagatgagagcacaccgcttcttacgctccttaacgaccaggataccgta
gacccccaagaggttgtgatcgaagaggagcggcgtcaacagatagagagtctcttctcc
gttctcaccccacgggaagccgaggtcatgcgccttcggcttggctttgagggaaactgc
gaacagatgctccaaaagataggagaaactctccatctttcgcgggagcgtgtgcgccaa
atagagatactagctataaaaaaactgaaatccgccgcacgcttgcgtgcattagaggag
taccttggcacctaa
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