Chthonomonas calidirosea: CCALI_01053
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Entry
CCALI_01053 CDS
T02699
Name
(GenBank) PAS domain S-box
Organism
ccz
Chthonomonas calidirosea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_4
PAS_9
PAS
HATPase_c
HisKA
PAS_8
Hpt
PAS_3
PAS_7
PAS_10
FleQ
AmiR_N
GAF_2
DUF6113
Motif
Other DBs
NCBI-ProteinID:
CCW34875
UniProt:
S0ETM6
LinkDB
All DBs
Position
complement(1228625..1232524)
Genome browser
AA seq
1299 aa
AA seq
DB search
MNAKISGVKRFLNRFGLGMLGKILNTSKDALFQKIARLSGNSSQGMVCSTAGLQEPTPSL
EAIYLDGDRVMRKLVIIYAIIGLALALAQRSWTGLLIVFALAALFFGFARLLPGKKPTRY
VASLVLQAYLPVYVLLTHNLIEVSVFFFIASTALIFYQDWVCVWPGLLLFLAQYGYWVTK
APSILQIWIQPPYPFALLHFLVPAVALTQALQCSYWSAHLRQRTITDSQRRLAIEQENAL
RKQTEHKMALLMEAMNCGVFGVDANGKCTFCNRHGAEMVGKKPEAVIGRRMTELFHPWED
AQAEAGSCPLEEAVRSNKTCEGKEIPLRRPDGTTQYISFTATPLYHGGKREGAVIVVYDV
TEERFAKERLQFLSIAASKTTSGIMITDANRRVIWANEAVQKISGYRLEEMLGRNPGTLL
QGPLTDLETVARMRQRLERGEGFREEIINYHKDGHAYWLDIEVTPVFDSAGRLQHFVAVE
MDITARKAAEEMLRQQKELLDTILTTIPYGIMWKDRNSVCLGCNPRCAADLGLSSPEEAV
GKTMEELYYWAPDQWERMRTEDRCVVERGEALLGCETLMPARNTNETRMFSYNKLPLRDG
EGNVIGSIVIYSDITEQKRIESHLAYTAKVLEQKNQELEEARDQALAAARAKSEFLANMS
HEIRTPMNGVIGMTDLLLQTNLDPEQRDYAETIRSSADALLVVINDILDLSKIEAGKMTI
EEVDFDLRALFDEIGSLFAPKAYERRIELACVIPPDFPHLLRGDPTRIRQILTNLVSNAL
KFTEKGEVVMEVQALSETADRVTLRLSVRDTGIGIPLERQACIFESFTQADGSTSRKYGG
TGLGLTICKHLVELMGGRIGLQSRPGEGSTFWVELALKKQEQAASAPTVPATSLEHKRVW
VVDDNTTNRTILHKYLEAWGCDVAELGSGEDAVNRIKWDSKVDVVLLDVHMPTMDGETTA
RQLKRYAPIVPIIFLSSEMKHFTASELQELGVAAALTKPIRQSQLFDALITTLEAKRPQD
GVQGDEEQGRFDGNLQEPLKLQVLLAEDNPVNQKLAMRLLERWQCRFDLAHNGREAVELA
KQRRYDVILMDVQMPEMDGFEATASIRQIERSLQRHTPIIAMTAHAMAGDRERCLQAGMD
DYVSKPIHTDALYALLRRFVQQEREIPSHKEEKMPEEDLHKGPLDLHALSALCGGEEALM
QEMITLFYEEVPGQLNELWEACACGEAEQIREAVHKLKGSCRTVAASRMTEACQQLETLA
RSGELGEMKRLLDEIEACYRELEAWKEPYKHLRGMERAA
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaaaatctcaggagttaagaggtttttaaatcggtttggcttgggcatgctg
ggcaagatcctaaatacaagcaaggacgccttgttccaaaaaatcgcaagactatctggg
aattccagtcaaggtatggtatgcagcaccgcaggccttcaggaaccgactccatcatta
gaggcgatctaccttgatggcgatcgcgttatgcgtaaacttgttatcatctacgcgatc
attgggctcgcattggccttggctcagaggtcttggacgggcctcttgatcgttttcgct
ctcgccgccttgttcttcggtttcgcacgactccttcctgggaagaaaccgacgcgctac
gtggccagtcttgtcttgcaggcctatctgccggtctatgtgcttttaacgcataacctc
atagaggtgagcgttttcttcttcatcgcttccacagccctcatcttctatcaggattgg
gtatgcgtgtggccgggcttgttgctgtttctagcccagtatggttattgggtaacgaag
gcgccttccatcctacagatttggatacaaccgccctatccctttgccctcctgcatttt
cttgtgcccgcggtggcgctgactcaggcgttgcagtgcagctactggtcagcacatctg
aggcagcgcaccataaccgattcgcaacgtcggttggcgattgaacaagagaacgcgcta
cgcaagcagacagaacacaagatggcccttttaatggaggccatgaactgtggcgttttt
ggagtagatgcaaacggcaagtgcaccttttgcaatcgccatggagccgaaatggtgggg
aaaaagcctgaagccgttattgggcgacgcatgacagagctttttcatccatgggaggac
gctcaagcagaggcaggctcttgcccccttgaggaggctgtacgctcgaacaagacctgt
gagggaaaagagatccccttgcgccgaccagacggaacgacccaatacatttcgtttaca
gcaacacccctctatcatggtgggaagcgcgaaggggctgttattgtcgtttacgacgtt
accgaggagcgtttcgctaaggagcgtctacagtttctttccatcgctgccagcaagacg
actagcggcattatgattaccgatgcgaaccgtagggtgatttgggcgaatgaggccgtt
caaaagatttcgggttatcgcctcgaagagatgctgggcagaaatcctggcacacttttg
caagggcctttaaccgatctggagacggtggcgcgaatgcgtcaacgcctagagagagga
gaaggctttcgagaggagatcatcaactatcataaagatggacacgcttactggctggat
atcgaggtaacgccggtttttgattcggcaggtcgcttacagcactttgtggcggtggag
atggatattacggcgcgcaaggccgcggaggagatgctgcgccaacagaaggagttgctg
gacaccatcctcacgaccattccttacggcattatgtggaaagataggaactccgtttgt
ctcggttgcaatccgagatgtgcggccgatctagggttgagctctcccgaagaggccgtg
ggtaaaaccatggaggagctttactattgggcaccggatcagtgggagcgcatgcgaacg
gaagatcgctgtgttgtggagagaggcgaggcattattggggtgcgagaccctaatgcct
gctaggaacacaaacgagacgcgcatgttctcttataacaaactccccttacgcgatgga
gaaggcaacgttattggctccatcgtgatttattccgacattaccgagcagaagcgaatc
gaatcgcatctagcctacacggccaaagttttggaacagaagaatcaggagctagaagag
gctcgtgaccaagcattggccgccgcacgtgctaaaagtgagtttttggccaatatgagt
cacgaaatacgaaccccaatgaatggggttattgggatgaccgatctgctgttacagacg
aatctggatcctgagcagcgcgactatgcggagaccatccgcagcagcgccgatgcgctc
ctagtcgtcattaacgacattctggatctctccaaaatcgaggcgggtaagatgaccatc
gaggaagtagattttgatctccgagcccttttcgatgagatcggcagtctttttgctccc
aaggcctatgaacgacgtatcgagctggcctgtgtcattccgccggattttccgcatctt
ttgcgtggtgaccccacacgcatccgtcagattctcacgaatctcgtgagcaatgcgctg
aagttcactgagaaaggtgaggtggttatggaggtgcaggcgctttcggagacagccgac
cgggttacgctgcgcctatcggtacgagataccggcatcggcatcccattggaacgacaa
gcctgtatttttgagagctttacccaggcggacgggagcacctcgcgcaaatatgggggc
accggccttggcttgacgatctgcaagcatttagtcgagctgatgggaggtcgcattggg
ctacagagcaggcctggggaaggaagcacattttgggtggaacttgctctcaaaaaacag
gagcaggctgcgtctgcaccaactgttccagcgacaagcttggaacacaaacgggtttgg
gtggtagatgacaacacaaccaaccgaacgattttgcataaatacctggaagcctggggg
tgcgacgttgccgaactgggtagcggggaagatgctgtgaaccgtataaagtgggattcc
aaagtggatgtggtgctactggatgtccacatgcccacaatggatggagagaccacagca
cggcagctaaaacgctatgctccaattgtgcccatcatctttctctcttctgagatgaag
cacttcactgccagcgagctccaggagctaggtgtggcagcggcacttaccaaaccaata
cggcagtcgcagctctttgatgcgctgatcacgacgcttgaggcaaaaaggccccaagat
ggtgtgcagggagatgaggagcaaggccgcttcgatgggaatcttcaagagcctttgaag
ctgcaggtgcttttagcagaggataatccggtgaaccaaaaactggcgatgcgccttttg
gagcgttggcaatgccggttcgacctagcgcataacggacgggaggccgtggagctggca
aagcagcggcgctacgatgtgatcttgatggacgttcagatgccggagatggacggtttt
gaggcgacggcatccattcggcagatagaacgttctctacaacgacatactccgatcatc
gcgatgacggcccatgcaatggctggtgatagggagcgttgcttgcaggccggcatggac
gattacgtctccaaacccattcataccgatgctctctatgccttgctacgccgttttgtg
cagcaggagagagagattccatctcataaggaagagaagatgccagaggaagatctacat
aaagggccgctggatttacacgccttgtcggcactttgtgggggagaagaggccttaatg
caggagatgataaccctcttctatgaggaggtgcctgggcagcttaacgagctctgggaa
gcctgcgcctgtggggaggcggagcagattcgggaggccgttcataagttaaaggggagt
tgtcgcacggtggctgcaagccgcatgacggaggcctgtcagcaactggagacacttgcc
cgttcaggcgaactaggagaaatgaaacgcctactcgatgagatcgaggcgtgttataga
gaattagaggcatggaaagagccttataagcacctacgtggaatggagagagctgcatga
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