Chthonomonas calidirosea: CCALI_01069
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Entry
CCALI_01069 CDS
T02699
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccz
Chthonomonas calidirosea
Pathway
ccz03030
DNA replication
ccz03410
Base excision repair
ccz03420
Nucleotide excision repair
ccz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCALI_01069
03410 Base excision repair
CCALI_01069
03420 Nucleotide excision repair
CCALI_01069
03440 Homologous recombination
CCALI_01069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccz03032
]
CCALI_01069
03400 DNA repair and recombination proteins [BR:
ccz03400
]
CCALI_01069
Enzymes [BR:
ccz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCALI_01069
DNA replication proteins [BR:
ccz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CCALI_01069
DNA repair and recombination proteins [BR:
ccz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CCALI_01069
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCALI_01069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
CCW34891
UniProt:
S0EX70
LinkDB
All DBs
Position
complement(1254031..1256802)
Genome browser
AA seq
923 aa
AA seq
DB search
MESENGVKRKLILIDGYSLLFRAFFAGQALTTSDKRPTGALYGLANMLLSVLQSDKPDAI
MVCWDAHAPTFREQEFIDYKAHRPSAAPELKEQMPVARQLVSAFGIPCVELAGYEADDII
GTLAHKGKAEGYQVIVITGDSDQLQLVDDHRVIVEITQRGVSERKAYDRQAVYDRYGVWP
EQIPDFKALTGDASDNIPGVPGIGEKTAAKLLQQFGTLENLLEHLDQVTPPRIQQALKEA
KEQALFSKRLATIVCDVPLEVEIVPYSPSEADWQRVRAIFRDLEFRSLLARIPQPSSPLA
AREEEAPEERFDVAYRPIRDAAALKHALEVVKTKGRVAIRLELEGDAPLDAKLRGVAFAV
EETEGENGGFKPSSYYVAIQEPEAIGGLWSFGEGGASDQEGGYVASLQELEPLFNASGIR
RLVYQAKQVLIVLQRHGVRPLPFDFDVQIAAYLLDAGRSAYPLMDIAETYLRRRLELEDA
FAPAERLMVEAGAILALEQPLERQLETNGMTKVFYEIEMPLVPVLAAIEQHGLLVDVDYL
SVLSQKMAEQIAKIAAEIYELAGMEFNIGSPKQLQEVLFNKLQLPRGKKTKTGYSTGADL
LEQLAPRYEIARKILEYREMAKLKATYADALVRLVRPDTHRVHTSLNQTITSTGRLSSSD
PNLQNIPIRSEVGRQIRRAFIAPNGYKLLSCDYSQIELRVLAHVSDDPTLIQAFLNDEDI
HAATAATVFGVEVAQVTPEQRRLAKTINFAVIYGQSAFSLAATLGVETGVAHEWIQAYFA
RLPGVKRYIEEIKELAHRQGWVQTLFGRRRYLPDLHSGNHQIRQAAERAAINMPIQGTAA
DIMKLAMIRVYHHLNAREDCALLLQVHDELLFEVKEEEIEACVAEIVPLMQEAYPLKVPL
KVDAKVGTDWANMENVTSPLPKR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgaaaacggtgtgaagcgaaaactgatccttatagatggctatagcctcttg
tttcgggctttttttgcaggtcaagcgcttacgacaagcgataagcgaccgaccggcgcg
ctctacggtctcgccaatatgctgctgtcggtgctgcaatcggataagccggacgccatt
atggtgtgctgggatgcccatgctcccacctttcgcgaacaggagttcatagattacaaa
gctcatcgtccctccgccgcgccggagctgaaagagcagatgccggttgccaggcagttg
gtaagcgcttttggcattccctgtgtggaacttgccggctatgaggccgacgacatcatc
ggcaccttggcgcacaaaggcaaggcagaaggttatcaggtgattgtgattaccggcgac
tcggatcaactacagcttgtagacgaccatcgtgttattgtagagatcacccaaaggggg
gtttcggagaggaaggcctacgatcgtcaggctgtctatgaccggtatggggtatggccc
gagcagatacccgattttaaagccctcaccggcgatgcctccgacaacattccgggggtg
cctgggatcggagagaagacggcggctaaactgctccagcagtttggaacgctcgaaaac
ctattggagcatctcgaccaggtaacgccgccccgcattcagcaagcgttaaaagaggcc
aaagagcaagcgctcttttcaaagcgcctggccaccatcgtttgcgatgttcctctggaa
gtcgaaatcgtgccctattcgccaagtgaggcggattggcagcgagtacgcgctatcttt
cgcgatctggagtttcggtcgctgttggcgcgaattccacagcccagttcacctctcgca
gcacgcgaagaagaggcaccggaagagcggttcgatgtggcctatcgtcccataagggac
gctgcagcgttaaaacacgccctggaggtggtaaagacgaaagggcgtgttgccatccga
cttgagctagaaggagatgccccactcgacgccaaactgcgtggagtggctttcgctgtt
gaggagacggagggggagaacggtggttttaagccgagcagctactatgtagctatccaa
gaaccggaagccatcggagggctttggtcttttggagagggcggggctagcgatcaagag
gggggctatgtggcctccctacaagagttggagcctctgtttaacgcctcggggatacgg
cggctggtctatcaggcaaagcaggtgctcatcgtgctgcaacgccatggcgttcgtccc
ctgccatttgacttcgatgtccagatcgcggcctatctattggatgcggggcgaagcgcc
tatccgctaatggacatcgcggaaacctatttacgccgccgactcgaactggaggacgct
ttcgcaccggcggaacgcctgatggtggaggctggggcgattttagctttggaacagccg
ctggaaagacaactggagaccaacggcatgaccaaggtgttctatgaaatagagatgcct
ctcgtgccggttctagccgccattgagcagcatggccttttggtagacgttgactatctt
tccgttctaagccaaaagatggcagaacagattgcaaaaatcgctgctgaaatctatgag
ttggccggcatggagttcaatatcggctcgccaaagcagctccaggaggtgctcttcaat
aagctgcagttgccgcgtggtaagaagacaaaaacgggctactccaccggcgccgatctg
ctggaacagctcgccccacgctatgagatcgcccgaaagatattagagtatcgagagatg
gccaaattaaaggctacctatgcggatgccttggtgcgtcttgtgcgtcccgatacccat
cgggttcataccagccttaaccagacgataacgagcacagggcggcttagctcttccgac
ccgaacctgcaaaacatcccgatccgttcggaggtagggcgccaaattcggcgcgctttc
attgcgcccaacggttataagctgctttcatgcgactactctcagatcgagctacgggtg
cttgcccacgtttccgatgatcccacgttgattcaggcctttttgaacgatgaagacatt
cacgcggcaacagctgccactgttttcggagtagaggtagcccaggtaacgccggagcag
cggcggcttgctaagaccatcaacttcgccgtgatctacggtcagagcgccttctccctt
gccgccactttgggcgtagagacaggtgtggcgcatgagtggatccaggcctatttcgct
cgacttcctggagtaaagcgctacattgaggagataaaagagctagctcatcggcaaggt
tgggtgcagacgctttttggtcgccggcgctatctgcccgatctgcatagcggtaaccat
cagattcgtcaagcggcggagcgagcggccattaacatgcccatccaaggcactgcggcc
gatatcatgaaattagccatgattcgggtctaccatcacctaaacgcgcgtgaggattgt
gctctcttgctacaggtacacgacgagctgctgtttgaagtgaaggaagaggaaatagag
gcctgtgttgctgagatcgttcctttgatgcaggaggcttatccgctgaaagtacctctt
aaggtggacgcgaaggtgggcacggactgggcgaacatggagaatgtaacatctccattg
ccaaagcgatag
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