Chthonomonas calidirosea: CCALI_01259
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Entry
CCALI_01259 CDS
T02699
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
ccz
Chthonomonas calidirosea
Pathway
ccz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CCALI_01259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccz03021
]
CCALI_01259
Transcription machinery [BR:
ccz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCALI_01259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_31
KORA
HTH_10
NirdL-like_HTH
Asp_decarbox
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CCW35077
UniProt:
S0EYP2
LinkDB
All DBs
Position
1486804..1487850
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AA seq
348 aa
AA seq
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MPLEMAEMYELGVLERNLDEMEETTEALSPSDIEDSTVEEIEISEPGFAPGEETIADASE
LEESAQAWLRRAGKMALLTHEQEIELARQIETARQTGDKELERRAKERLVLANLRLVASV
ARRYLGHGMPIEDLMQEGAIGLMRAVDRFNYRRGYRFSTYAIWWIRRSITRAIADQSRLI
RLPVHVTDTLGRINKTRLALRQRLGRAPSRAELAKELGMSEEKLTELLRSSVEPLSLEMP
VGEEGENRLADLIPAGDAHNPATEAAHMAVRDALMEVLAELTPRERDVIILRFGLDGAEP
RTLEEVGNALGLTRERVRQIESSALAKLRQQRNNPRLREVIGLKPTPE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggagatggcagagatgtatgaattaggcgttctggagcgcaatttggatgag
atggaggagacaaccgaggcgttgtccccttctgacatagaggattctacggtagaagag
atagagatttcggagccgggctttgcacctggtgaggagacgatagccgatgccagcgaa
ttggaagagagtgcacaagcctggctacgacgcgccgggaagatggctttgctcactcac
gagcaggagatcgagcttgcccgccagatcgagacggcacgtcagactggagataaggag
ctagagcgtcgagcaaaagagcgcctcgtgctagccaatcttcggctcgtggcatcggta
gcacgccgctacctggggcacggcatgccgatagaggatcttatgcaggagggcgccatc
ggccttatgcgcgcggtggatcgctttaactaccggcgtggctaccgatttagcacctac
gctatctggtggatccgtcggtccatcacgcgcgccatcgccgatcagtcgcgactgatt
cgcctgccggtgcacgttaccgacacgcttgggcgcatcaataaaacgcgtcttgcgctg
cgtcagcggctagggcgcgccccctcacgggccgagttggctaaagaacttggcatgtca
gaggagaagctcaccgagttgctgcgtagctccgtggagccgctttccttagaaatgccg
gtgggtgaagagggcgagaaccgattggctgacctcattcctgcaggtgacgcccataat
ccggcaacagaagccgcgcacatggccgtgcgtgacgctctcatggaggtgcttgccgag
ctaacgcctcgtgagcgtgacgtcatcattcttcgcttcggactggatggcgcagaacca
cgcaccctagaggaggtaggaaacgcccttggtttaacccgtgaacgcgttcgccagatc
gagtcgtctgccctcgcaaagctgcgccaacaacgcaacaatccgcgcctgcgcgaggtg
atcggcctgaagcccacgccggagtag
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