Chthonomonas calidirosea: CCALI_01540
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Entry
CCALI_01540 CDS
T02699
Name
(GenBank) DNA-directed DNA polymerase III (polc)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccz
Chthonomonas calidirosea
Pathway
ccz03030
DNA replication
ccz03430
Mismatch repair
ccz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCALI_01540
03430 Mismatch repair
CCALI_01540
03440 Homologous recombination
CCALI_01540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccz03032
]
CCALI_01540
03400 DNA repair and recombination proteins [BR:
ccz03400
]
CCALI_01540
Enzymes [BR:
ccz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCALI_01540
DNA replication proteins [BR:
ccz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCALI_01540
DNA repair and recombination proteins [BR:
ccz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCALI_01540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HHH_3
HROB
SSB
Motif
Other DBs
NCBI-ProteinID:
CCW35356
UniProt:
S0EUJ5
LinkDB
All DBs
Position
complement(1815363..1818872)
Genome browser
AA seq
1169 aa
AA seq
DB search
MSSSFVHVHCHSEYSLLDGANRLSALVQRAAELEMPALALTDHGVMYGVADFYERCKAAG
VKPILGVEAYVAPRRYTDKQPKLDQAAYHMVLLARNLQGYKNLLKLTSIAALEGFYYKPR
IDRDLIQRYSEGLIGTSACLGSEICTAILSKDYKRALDTAAYYKDVFGDGNFYIELQNHS
LPEQIECNEHLLKIARQLRLPVICSNDVHYLSKQDADAHDILLCIGTGSTVNDPDRLRYA
TQEFYLKSEQEMRALFADYQEAVENTLGIAEKCNVELEFGRCPLPCPDIPPGLTPHQYLT
QLAEEGLRQRYNGNPSEKVIARLRYELDIIERTGFSQYILIVRDFARFAAQKGIFFGVRG
SAAGSLVSYLIGITDVDPVEYGLTFERFLNPERVQMPDVDMDFEDARRAEVIEYVTKKYS
PHQDDPTQARVAQIITFGTLQARAVLRDAGRALGMPMADVERLCKMIPTHPIGITIDKTL
EINQEFRNAYVRDPQAKKLIDTARRLEGIARHASVHAAGVIISHEPLVEYTPLTRSADGG
CVTQYVASTLEKIGLLKMDFLGLINLSILAQAVRNVEQTTGKKIDVRKLPLDDPKTFELL
ARGETVGVFQLESPQMRRYIAELKPSSVRDLAAMVALYRPGPMAHIPRFIRCKHGLEKIE
YPHPWLEDILKETYGVIVYQDQVMQIAQVIAGYTLGQADILRRAMGKKKKEEMVKQRANF
LAGAKAKGVPEKKANEIFDLMEPFAGYAFNKAHAVCYAMVAYQTAYLKANYPVEYMAALM
ACFSEKSDKLVTCMEECRRMGITVLPPDINVSQADFTVEPLPNGAKAIRFGLSAIKNVGR
AAVEAILKARQEGGPFTSLVDFCCRTLGNEGGVSRSTVETLILAGAFANLPKHSNRHALM
EALDACCQAAARVQRDKKLGQASLADIFLSNETTVEEVTIPDVPDYPSLQLLGYERELLG
LYISEHPLQAFQETFRRRRVTSIADLPDLPDKQEVLIGGIVTSVKLFTSKKSGEPMAFFT
LEDMTGSVSCTIFPTAFAAQRQNLEKDRVVLVRGRTSHRERVRDDDEDDRPIVEILAEEI
SPLTESMVSAAHKANRIVVRLDPNRPETLRFVRDTIEQHRGNGNACPVYLRINRRDKTYE
MRTELLAEYTDDFRQAVEHFLGRQAVWVE
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcagctttgttcacgtccattgccattcggagtacagccttttagacggggcc
aatcggctttctgcgcttgtacaacgtgcggcagagctagagatgcccgctcttgccctc
accgatcatggcgtgatgtatggagtggcggacttttatgagcgttgtaaagcggccgga
gtgaagcccattctaggggtagaggcctacgtcgctccgcgtcgttataccgacaagcaa
cccaagctcgatcaggcagcctaccacatggttttattggcccgcaatctgcagggctat
aaaaatctcctcaaactcacctctatcgcggccttagagggtttttactataagccccgc
atcgatcgcgacctcatccagcgttactccgaggggcttattggcacctctgcttgtctt
ggcagtgagatctgcacggccattctcagtaaagattataagcgcgccctcgacacggcg
gcctactataaagatgtgtttggagacggcaacttctatatcgagctgcagaatcactct
ctgcccgagcagatcgagtgcaacgagcatctgcttaaaatcgctcgtcaacttcgtttg
ccggttatctgttccaacgatgtgcactatctcagcaaacaggatgccgatgcgcacgac
attctgctctgcatcggaaccggctcaacggtcaacgaccccgaccgccttcgctacgcc
acccaagagttctatctgaagagcgagcaggagatgcgggcgcttttcgccgactatcaa
gaggcggtcgagaacacgttgggcatcgccgagaagtgcaatgtagagttagagtttggc
cgttgtcctctcccctgtccggatattcctccggggcttaccccccatcaatacctaaca
cagttggccgaggaagggctacgacagcgctacaacggcaatccttccgaaaaggttatc
gcgcgtctgcgctacgagctggacatcatcgaaagaaccggtttttcgcagtacattctc
attgtgcgcgactttgcccgctttgccgcccaaaagggcatctttttcggggtacgcggt
tcggctgccggcagccttgtctcttatctcatcggtatcaccgatgtagaccctgtggag
tacggccttaccttcgagcgcttcctgaatccggagcgcgttcagatgccggatgtggat
atggattttgaggatgcccgccgggccgaggttatcgagtacgtgaccaaaaagtatagc
cctcatcaagacgacccaacccaagcccgtgtcgcccaaatcatcactttcggaaccctt
caggcgcgggccgtgctgcgcgatgccggccgtgccctcggaatgccgatggccgatgta
gagcgcctctgcaagatgattcctacccatcctatcggcatcacaatagataaaaccctt
gagatcaatcaggagtttcgcaacgcctatgttcgagacccgcaggcgaaaaagctgatt
gatacggcgcgacgcctagagggcattgcccgccatgcctccgtccatgccgccggcgtg
atcatatcgcacgaacctctcgtggagtacaccccgctcacccgctcggccgatgggggc
tgcgttactcagtacgtggcctcaacccttgaaaagatcggtctcttgaagatggatttt
ctgggccttatcaacctttctattctggcccaagcggtgcgcaatgtggagcaaactacc
ggcaaaaagatagatgtgcgcaagctgcccctcgacgatcccaaaaccttcgagctgttg
gcacgaggagaaacggtaggggtgttccaactggagtcgcctcagatgcggcgctacatt
gcggagctaaaaccctccagcgtgcgcgacctcgcggccatggtagctctctatcgcccc
ggccctatggcccatatcccacgttttatccgttgtaaacatgggctggaaaagatcgaa
tatccccacccatggttggaagatatcttaaaagagacctatggggtcatcgtctatcaa
gaccaggtgatgcagatcgcccaggtgatcgcgggctatacgctagggcaggccgacatt
cttcggcgtgcgatgggcaaaaagaaaaaggaagagatggtaaaacagcgcgctaacttc
ttggccggagcaaaagccaagggggtgccggagaagaaagcgaacgagatattcgacctt
atggagccgtttgctggctatgccttcaataaggcgcacgccgtgtgttatgccatggta
gcctatcagacggcctacctcaaagccaactatcctgtagagtacatggcggcgcttatg
gcctgcttcagcgagaagagcgacaagctcgtaacttgcatggaagagtgcaggcgcatg
ggcattacggtgctgccgcccgacattaatgtcagtcaggccgacttcaccgtggaaccg
ctgcccaacggtgccaaggccattcgctttggactatcggccatcaaaaatgtgggtcga
gccgctgtagaggccattctaaaagcgcgacaggaaggcgggccgtttaccagtttagtg
gacttctgctgtcgcactttgggcaatgaagggggcgtctctcgttccactgtggaaacg
ctgatccttgccggcgcttttgcaaacctgcccaagcacagcaatcggcatgcgctcatg
gaggcgctcgacgcctgctgtcaggccgcagcgcgcgtccaacgcgacaagaagctggga
caagcctcccttgccgatatctttctctccaacgagacgactgtcgaagaggtaaccatt
cccgatgtgcccgactatccttcgcttcagctgttggggtatgagcgtgagctactcggc
ttgtatatctccgaacatccgctgcaggcctttcaagagaccttccgacgtcgccgtgtt
acctctattgccgatctgcccgatctgcctgacaagcaggaggtgttgatcggtgggatc
gtgacatcggtcaagctgtttacctctaaaaagagcggggagcctatggcctttttcacg
ttggaagatatgacgggcagcgtctcgtgcaccatctttccaacggccttcgcggctcaa
cgtcagaacttagaaaaagatcgcgtggtgctggtgcgtgggcgtacgagccatcgagag
cgcgtacgtgatgacgacgaggacgacaggcccatcgtcgagatactggcggaggagatc
tccccccttaccgaaagcatggtaagtgcggcccacaaggcgaaccgcatcgtggtgcgc
ctcgaccctaaccgcccggagacgctgcgcttcgtgcgcgacacgatcgagcagcatcgg
ggaaatggaaacgcctgcccggtgtatctgcgcatcaaccggcgcgataaaacgtatgag
atgcgcaccgagctcttagcggagtataccgacgattttcgacaggcggtcgaacatttt
ttggggcgtcaggccgtgtgggtagaatag
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integrated database retrieval system
