Chthonomonas calidirosea: CCALI_02169
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Entry
CCALI_02169 CDS
T02699
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccz
Chthonomonas calidirosea
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccz03016
]
CCALI_02169
Enzymes [BR:
ccz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCALI_02169
Transfer RNA biogenesis [BR:
ccz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCALI_02169
Prokaryotic type
CCALI_02169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
CCW35976
UniProt:
S0EX32
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All DBs
Position
2560866..2561870
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AA seq
334 aa
AA seq
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MSTTANVSLGNVGKIDRVNEMASATESPTLSGLLVIDKPAHRTSHDVVQWVRRRLGVRRV
GHTGTLDPLATGVLVLCVGQATRLAEYLSASRKAYLTEVVFGIETDTLDITGKVLRERDA
GHLTAEALKPILKRFCGLIQQVPPMVSAKRHQGRRLYDLAREGQVVERAPQTVQIERLEL
LDFRAGDHPVAKLEVVCSSGTYIRSLAEDLGAALEVGGTMQSLRRVWVGADEQHAFTLEQ
AVTLDVLETKIVEGKLQEVLLPPIVAMAGRPHVVLSELQVQRIRHGQAVPLSALEPMQLA
SPNEFVALLDADGNFIGVGRIEESRLQPVKVLHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcactaccgccaacgtcagcttgggcaacgtggggaagatagaccgtgtaaatgag
atggccagcgcaaccgaatcccccacgctaagcggcttgcttgttattgataagccggca
catagaacctcgcacgacgtcgtacagtgggtgcgtaggcgtctcggtgtgcgccgtgtg
gggcatacgggcacgttagaccctttggcaaccggcgtgctcgtgctttgcgtcggccag
gccacacgcttggccgagtatctcagtgcatctcgaaaggcctatctcaccgaggttgtg
ttcggtatcgaaacggatacgcttgacattaccggcaaggtgctacgtgagcgcgatgcc
ggtcatcttacagcggaggctctcaagccgattctaaagcgtttttgtggcctcattcaa
caggttcctcccatggtttccgccaagcgccaccaaggccgtcgtctctacgacttagcc
cgtgaagggcaggttgtggagcgagcgccacaaaccgttcagatcgagcgtctggagctg
ctcgactttcgtgcgggcgatcatccggtggcaaagctggaggtggtctgttctagcggt
acctatattcgctctcttgcagaggacctaggggcggctttggaagtgggaggcacaatg
cagtctttacgacgcgtctgggtaggtgcggacgaacagcacgcttttactttagaacag
gcggtcacgctcgatgttctcgaaacgaaaattgtagagggaaagttgcaagaggtgctg
ctccccccgatcgtcgcaatggccgggcggccgcatgtcgttctttccgagttacaggtg
cagcgcattcgtcacggtcaggccgtacccctttccgctcttgaaccgatgcagctagcg
tcgccgaacgagtttgttgcgcttctcgatgccgatgggaacttcatcggggtgggacgg
atagaagagagtagactgcaaccggtgaaagttttgcacttatga
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