Chthonomonas calidirosea: CCALI_02237
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Entry
CCALI_02237 CDS
T02699
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
ccz
Chthonomonas calidirosea
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccz02000
]
CCALI_02237
Transporters [BR:
ccz02000
]
Other transporters
Pores ion channels [TC:
1
]
CCALI_02237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF748
Motif
Other DBs
NCBI-ProteinID:
CCW36044
UniProt:
S0EZ79
LinkDB
All DBs
Position
complement(2639698..2644752)
Genome browser
AA seq
1684 aa
AA seq
DB search
MRYVRRLLNGLLLLLPAGLVLVGGIFGVRRWTAFLLSDQNLARILSNQATQALGRPVRVG
RVHFQYSPFRLTANRVSLYQVFVAASPHTSSVPLATAAKVSLSYDLATLLFSHDLQTPYV
RQIQLTDPFLFVARNRSGLWNFSQLLKPKKKPGRPLTRHIFIANGTLRYSDSALLSPRTA
AVHAILTHINGTIALLPNGTFGLDLSGVGRQGLQGTLHSTLLLQPNQVLTLQIDGKGLHL
PAIAQQLLPGRIGQVMDGQADLHADLLLAPHPLMAAWVIGKHWMQLEGHLHLYNTAFQPA
HLGAPITGLQADLTLLPTLCQGTVKARFAGSPIAMSGSVANLTQPFQNLVADVEGDSQNL
HFAQLWSQLRYLPWFQTLSPQVRSLLPRLNATSPSLHFALVGPLNHPVAQLQGSLNDLNY
RNITAGPLQLKAFYADNRLTTDLHGALAHGQIALRVNAITSPKLALVGQAHAQDLRLQTL
GSLLHQPMEGTVKADVAFRIQNGHEPQFNTQVELNNFRSKGRRIALAYLRAQGTPQQVFV
RNLRLEDDMGIALAHGLVDIAHQKLNLRLVADEVDIGGLWRELTQAKPTRAPLFTEESSG
STSSSSALFDLAQLKGVGYLRAHIGGSFHQPQVTGVLNAFSIQAGRLGFDRISAGFQLTP
NSLQIVRGLAEQYPGELTLRGTVSGLQSHDPGIALVAAVRHVDVADLLEQLGASNSLQKA
SIRPDSIVGSLESSEIDVGGTLHDLHLLHPVTFSVQHASLNGVAIPNAEATLFYTSHQGF
QLQNAQITAANGQIVAHGTLTPDHQMHLVLIGDSLSIPDLAAMLTGKPYADLTGSIGFFS
QIQGPLNNLEATANLNGANLAYRGDPLGQITSQWNYQKDRIQVSQLTFLPTDSATSSTPN
SESTEAITVHNATYDLKSQQISGSVEWNQLQLARFLRLLGASPLAQTASGQRVLTYLRSF
NPPLQGSFSGTAQLTGTADSPVADIRFRLAQIQLGNNIIPSVEGSGRLTKEALVMPLPQS
TAPALTLNSPEATLFARQINVAFHGPIQGDLSLYNFDLGRLTGWLPTEYSSQEATSSSAL
LQTLSQLKGKADLFVVASGTTKAPILDISADAKNVLLHTSFRDFRVDSIDISHLRIAEPR
AVLDPVTVSIAVAGADSQPEQFETEFSGSVDFSWKPPFLSNTAALDFTARVPQQKIALLR
VFAPGLALDTDGVFSLSAHITNTVQSPNVNGALDIQADRLRIGYLDPTSQKPHYLRTGLR
NLAGSLLFNGSQIQVSNDFRAETALFDSKTGAVLPNTVHPVNLFGALPITQQSATGITLQ
AGDIIFDESPIPGFRSGTVRGEARVLLQLAGSLTKPELQGDVYLSNALAVPPSDVGGTGT
GGFVIPIVHRFQIALHLDRNVQLSASALSARVSGTILVSGVPQRAANIAPLEEPSLTGAS
SNLAVQLNGTLDILEGRLNLPTARFTILPPGRITLSYPTQDPEQPNVPILGIDVNLRAQT
NMTLAAPGTFSGEKRYRVIVNAQGPITGNVFDPVTQRSRLRLSFQTDPPDFVGDQQLLEQ
RFLAALGGPVLSQNTFGLNPTQLFTQQLTSLVAGAVLPTIFEQPAHVLGFEELALNYDPF
QRLNLVISRHLFGPIYFTYTRTLVNAHIQETFRASFRFSRRFQLTFQQDEQGIKSLLLEG
ISQF
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgcggtatgtacgccgcctcttgaatgggctgcttcttctgttgccggccggcctcgtg
cttgtggggggcatcttcggcgtgcgccgctggactgccttcctcttgtctgaccaaaat
ctggctcgtatcctctcaaaccaggccacccaagcccttgggcgccccgtgcgcgtgggg
cgagttcatttccaatacagccccttccgattaaccgcaaatcgtgttagtctctatcag
gttttcgtggccgcaagcccccacacgtcctctgtacctctggcaaccgcggcaaaggta
agcctgtcctacgatctcgcaactctcctcttctctcacgatctccaaacgccctatgtc
agacagattcaacttaccgatcctttcctcttcgtagctcgcaatcgctcgggcctatgg
aactttagccaacttcttaagcccaaaaagaagccggggcgaccgctcacccgtcatatc
ttcatcgctaacggcaccctacgctatagcgatagcgctctgctatcgccgcgcacggcc
gctgtgcacgccatcctcacccatatcaatggcactattgccctactgccaaacggcact
tttgggctcgacctcagcggtgttggccgacaaggcctccagggcacacttcattctact
ctccttctccaaccgaaccaggttctcacgcttcagattgatggaaagggtctccacctg
cctgcgatcgcccaacagcttctacctggccgaatcggccaggtaatggacggtcaggcc
gatctccatgccgatctgctgctagcgccccatcctcttatggcagcctgggtcattggg
aaacattggatgcagcttgaagggcatctacatctctacaacacggctttccagcctgcc
catctcggtgctcctatcaccggtctgcaggccgacctcacgctgcttcccacgctctgc
caaggcacggtcaaagcccgttttgccggaagcccgatcgcgatgtctggtagcgtggcc
aaccttacccaaccctttcagaacctcgtagccgatgtagagggcgacagccagaatctc
cattttgctcagctttggtctcaactgcgatacctaccctggttccaaaccctctcgccg
caagtgcggtctcttttaccacggctcaatgccacatctccttccctccattttgccctg
gtaggccctctcaaccatcctgtggcacagcttcaaggctctctcaacgatctgaactac
cgaaatatcaccgccggcccgctgcagttgaaagccttctatgcggataatcggcttacg
accgacctgcatggcgcgctcgcgcacggccaaatcgcgctccgagtgaacgccatcacc
tcaccgaaactcgcgctcgtcggtcaagcgcacgcacaagacctgcgactgcaaacgctt
ggcagtctccttcaccaacctatggagggcaccgtcaaagccgatgtggcgtttcgaata
cagaacggccatgaacctcagtttaacacccaagtagagctcaacaacttccgctcaaaa
gggcgccgcatcgcccttgcctaccttcgggcgcagggaacccctcaacaagttttcgtc
cgaaacctgcgcctagaagacgatatgggcatcgctttggcccacggcctcgtggatatc
gctcatcaaaaactgaatctccgactggtcgcagatgaggtggatattggtggactttgg
cgtgaactcacccaagcaaaaccaacaagagccccccttttcaccgaagagagcagtggt
tccacctcatcttccagcgcccttttcgacctcgcacagcttaagggagttggctacctg
agagcacatattggagggtctttccatcaaccgcaggtaaccggtgtgctgaacgccttt
tccattcaagcgggacgtttgggattcgatagaatcagcgcagggttccaattaacccca
aattcgctccagattgtaagggggcttgcagagcagtaccccggcgagcttaccctccgt
ggaaccgtcagcggcctgcaaagccacgacccaggtatcgccctcgtcgctgcggtgcgt
catgtagatgtggccgatcttctcgaacagctaggggcttcgaactctctgcaaaaggcc
tccattcgccccgactccattgtcggcagcctagaaagctccgaaatagatgtgggcggc
acacttcacgatcttcatctccttcaccccgttacgtttagcgtacaacacgcctctctt
aacggcgtcgctataccgaacgcggaggccactctcttctatacatctcatcagggcttt
cagctacaaaacgcacaaatcaccgctgcaaacggccagatcgtggcgcatggcacgctg
acgcccgaccatcaaatgcaccttgttctcataggagatagcctaagtattcccgatctg
gcggcgatgctaaccggcaaaccctatgccgaccttaccggttccatcggcttcttcagc
caaatacaagggccgctcaataaccttgaagctacagccaacctcaacggagccaactta
gcctatcgtggtgatcccctcggccaaattacaagccagtggaactatcagaaagatcgc
atccaagtaagccagcttacctttcttcccaccgattcggctacctcctctacgccaaac
tcagaatctaccgaagcgatcaccgttcacaatgctacctatgatctcaaatcacaacag
atttcaggcagcgtcgaatggaaccagcttcagctagctcgattcctccgcctgctggga
gcctctcctctggcgcaaacggcctctggccagcgtgttctcacctatcttcgaagcttt
aatccgcctcttcaaggcagcttctcgggcacagctcaactaaccggcaccgccgattcg
cccgttgccgatatccgcttccgcttggcccaaatccagctcggcaacaacatcattcct
tctgttgaaggcagtgggcgacttaccaaagaggcacttgtcatgccactgcctcaaagc
accgcccccgctctaacccttaacagcccagaagctaccctctttgcgcgacagatcaac
gtggcattccacggccccattcaaggcgatctcagcctctacaatttcgaccttggccgt
ctcactgggtggctccctacggaatactcaagccaggaggcaacatcgagcagtgcactg
ctgcagacgctttcacagttgaaggggaaagccgatctcttcgttgtcgcctctgggacc
acgaaagcgcccattcttgacatctcggccgatgcgaagaatgtgctcttgcatacctct
tttcgtgattttcgtgtagatagtattgatataagtcatcttcgcattgccgaaccccgt
gctgtcctcgaccccgtcaccgtatccatcgctgtagccggggcagacagccaaccagaa
cagttcgaaacggagttttccggctcggttgacttctcgtggaaacctccttttctatcc
aatacggcagcacttgattttacagcccgtgttccccaacagaaaatcgccctcctccgt
gtctttgcccctggccttgcgctcgacacggatggtgtcttctctctgtcggcccatatc
accaacaccgttcaatcccccaacgttaacggtgcgctcgatattcaagccgatcgtctt
cgcattggctatctcgacccaacttcacagaaacctcattatctgcgtaccggcctccgt
aacctcgcaggctcacttcttttcaacggaagccaaattcaagtttcaaacgactttcgc
gcggaaacagcccttttcgactccaaaaccggcgcggtcctgcccaataccgttcacccg
gtgaatctctttggggcgctgcctatcacgcaacagagcgcaacaggcattacgctgcaa
gccggagacattatcttcgacgaatcgcccatccccggttttcgcagtggcaccgtgcga
ggagaggcccgcgttctgctccaactcgcaggctcgcttacaaagccagaacttcagggc
gatgtctatcttagcaacgcgcttgccgttcctccatcggacgtggggggtactggcacc
ggagggttcgtcattccaatcgtccaccgtttccagatagccctccatcttgaccgtaac
gtgcagctatctgcttcggcgctcagcgcccgtgtgagcggaaccattctggtttctggg
gtgccacagcgtgccgccaacatcgcccccctagaagaaccaagccttaccggtgcctcc
tcgaatctcgccgttcaacttaacggaaccctcgatattctggaagggcgtctcaacctg
cccacagcgcgctttaccattttgccgcccgggcgcatcacactgagctaccccacccaa
gacccagaacagccaaacgtgcccattcttggcattgatgtcaatctgcgcgcccaaact
aatatgacactcgctgcccccggtaccttttccggagaaaaacgctatcgggttatcgtg
aatgcccaaggccctatcaccggcaacgtgttcgacccagtgacccaacgttcgcgtttg
cgcctttctttccaaaccgatccgcccgacttcgttggcgatcagcagctgcttgaacag
cgatttcttgccgccctcggcggcccagtgctttctcaaaatacctttggtctaaaccca
acgcaactctttacccagcagcttaccagccttgtggctggggccgttttgcccactatc
ttcgaacagcctgctcacgttctcggatttgaggagcttgccctcaattacgatcccttt
caacggctaaaccttgtcatcagccgccaccttttcggtcccatctacttcacctatacc
cgcacccttgtcaacgcccacattcaagagacgtttcgagcaagcttccgctttagccgc
cgcttccaactgaccttccaacaagatgagcagggtattaagtctttgcttctagaggga
ataagccagttctaa
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integrated database retrieval system